Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 MIR662-201ENST00000384847 95 ntBASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 LIN28AP1-201ENST00000429574 405 ntBASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 AL359075.1-203ENST00000462729 1002 ntBASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 AC092597.1-201ENST00000487352 616 ntBASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 COX11P1-201ENST00000489116 835 ntBASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 AL441883.1-201ENST00000566170 1045 ntBASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SND1-IT1Q9HBX3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 AL645728.1-201ENST00000366221 2101 ntBASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 FRMD8P1-201ENST00000440433 1524 ntBASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 GPR89P-201ENST00000407924 1495 ntBASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 AC103564.2-201ENST00000432853 1299 ntBASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 ATP5G1P1-201ENST00000448724 379 ntBASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 AC005332.3-201ENST00000589904 676 ntBASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SND1-IT1Q9HBX3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms