Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 HLA-J-203ENST00000494367 1087 ntBASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 AC025678.2-201ENST00000562061 970 ntBASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 MIR3197-201ENST00000582241 73 ntBASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 AL139011.1-202ENST00000642063 584 ntBASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A4Q9HBG4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 KRT8P39-201ENST00000396270 1433 ntBASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 AC023141.5-201ENST00000458585 616 ntBASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 RN7SL589P-201ENST00000481268 310 ntBASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 AL135744.1-201ENST00000565098 629 ntBASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 AC026120.1-201ENST00000611536 926 ntBASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP6V0A4Q9HBG4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 AKAP8P1-201ENST00000434743 1349 ntBASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 WASH6P-202ENST00000359512 1437 ntBASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 TFAMP1-201ENST00000412727 736 ntBASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 SPDYE11-202ENST00000450699 704 ntBASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 SPDYE9P-201ENST00000570642 692 ntBASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 AC011467.4-201ENST00000594891 528 ntBASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 AC092364.2-202ENST00000597012 1073 ntBASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 SPDYE10P-202ENST00000612005 668 ntBASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 SPDYE8P-202ENST00000612377 668 ntBASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A4Q9HBG4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms