Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 AC099522.2-201ENST00000607001 744 ntBASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 AL391005.1-201ENST00000623953 2435 ntBASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP13A3Q9H7F0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP13A3Q9H7F0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP13A3Q9H7F0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP13A3Q9H7F0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP13A3Q9H7F0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
ATP13A3Q9H7F0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
ATP13A3Q9H7F0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
ATP13A3Q9H7F0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 AL355306.1-201ENST00000415580 579 ntBASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 HLA-J-202ENST00000469281 1241 ntBASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 RARRES2P8-201ENST00000566335 367 ntBASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 AC006538.3-201ENST00000612495 578 ntBASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 AC139530.3-201ENST00000620344 690 ntBASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP13A3Q9H7F0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 AC078925.2-201ENST00000624013 1973 ntBASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 AC006538.1-201ENST00000567905 1585 ntBASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 AL671277.1-201ENST00000429656 993 ntBASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 AC004967.1-201ENST00000453589 447 ntBASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ATP13A3Q9H7F0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms