Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 CRYGEP-201ENST00000412192 528 ntBASIC14.89□□□□□ -0.03
NELFAQ9H3P2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 AC013467.2-201ENST00000605472 835 ntBASIC14.89□□□□□ -0.03
NELFAQ9H3P2 AC064836.3-201ENST00000607928 673 ntBASIC14.89□□□□□ -0.03
NELFAQ9H3P2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 PCDHA14-201ENST00000506751 2298 ntBASIC14.89□□□□□ -0.03
NELFAQ9H3P2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NELFAQ9H3P2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 AC006277.1-201ENST00000624348 1610 ntBASIC14.88□□□□□ -0.03
NELFAQ9H3P2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 AL603756.1-201ENST00000606511 2163 ntBASIC14.88□□□□□ -0.03
NELFAQ9H3P2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 KRT18P2-201ENST00000447938 1258 ntBASIC14.88□□□□□ -0.03
NELFAQ9H3P2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NELFAQ9H3P2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 MED15P5-201ENST00000423150 992 ntBASIC14.87□□□□□ -0.03
NELFAQ9H3P2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.87□□□□□ -0.03
NELFAQ9H3P2 AC091167.2-201ENST00000579581 588 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms