Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 KRT8P49-201ENST00000604166 1432 ntBASIC16.82■□□□□ 0.28
VPS11Q9H270 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VPS11Q9H270 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 AC243591.1-201ENST00000452967 1364 ntBASIC16.82■□□□□ 0.28
VPS11Q9H270 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.82■□□□□ 0.28
VPS11Q9H270 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS11Q9H270 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
VPS11Q9H270 NUS1P2-201ENST00000417358 873 ntBASIC16.82■□□□□ 0.28
VPS11Q9H270 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VPS11Q9H270 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
VPS11Q9H270 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.82■□□□□ 0.28
VPS11Q9H270 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS11Q9H270 AC092329.2-201ENST00000598402 547 ntBASIC16.82■□□□□ 0.28
VPS11Q9H270 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS11Q9H270 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
VPS11Q9H270 AL139011.1-202ENST00000642063 584 ntBASIC16.82■□□□□ 0.28
VPS11Q9H270 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.82■□□□□ 0.28
VPS11Q9H270 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS11Q9H270 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.82■□□□□ 0.28
VPS11Q9H270 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
VPS11Q9H270 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.81■□□□□ 0.28
VPS11Q9H270 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.81■□□□□ 0.28
VPS11Q9H270 AC079776.2-201ENST00000641154 1609 ntBASIC16.81■□□□□ 0.28
VPS11Q9H270 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.81■□□□□ 0.28
VPS11Q9H270 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 TSPY26P-202ENST00000565928 3884 ntBASIC16.81■□□□□ 0.28
VPS11Q9H270 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.81■□□□□ 0.28
VPS11Q9H270 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 AC126177.1-201ENST00000547829 2218 ntBASIC16.81■□□□□ 0.28
VPS11Q9H270 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 AL603832.2-201ENST00000566195 2125 ntBASIC16.81■□□□□ 0.28
VPS11Q9H270 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VPS11Q9H270 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.81■□□□□ 0.28
VPS11Q9H270 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.81■□□□□ 0.28
VPS11Q9H270 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
VPS11Q9H270 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.81■□□□□ 0.28
VPS11Q9H270 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.81■□□□□ 0.28
VPS11Q9H270 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.81■□□□□ 0.28
VPS11Q9H270 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VPS11Q9H270 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
VPS11Q9H270 MIR5100-201ENST00000579544 119 ntBASIC16.81■□□□□ 0.28
VPS11Q9H270 MIR3180-1-201ENST00000580374 94 ntBASIC16.81■□□□□ 0.28
VPS11Q9H270 MIR3180-3-201ENST00000584616 94 ntBASIC16.81■□□□□ 0.28
VPS11Q9H270 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.81■□□□□ 0.28
VPS11Q9H270 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.81■□□□□ 0.28
VPS11Q9H270 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.81■□□□□ 0.28
VPS11Q9H270 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.81■□□□□ 0.28
VPS11Q9H270 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
VPS11Q9H270 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.81■□□□□ 0.28
VPS11Q9H270 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS11Q9H270 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS11Q9H270 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.8■□□□□ 0.28
VPS11Q9H270 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.8■□□□□ 0.28
VPS11Q9H270 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms