Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 GPS1-213ENST00000580723 594 ntTSL 420.16■□□□□ 0.825e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-207ENST00000578392 552 ntTSL 419.51■□□□□ 0.715e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-210ENST00000580141 924 ntTSL 518.39■□□□□ 0.535e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-219ENST00000583641 795 ntTSL 217.71■□□□□ 0.435e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-211ENST00000580627 543 ntTSL 417.15■□□□□ 0.345e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-215ENST00000581578 470 ntTSL 415.18■□□□□ 0.025e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-220ENST00000583885 594 ntTSL 414.25□□□□□ -0.135e-6■■□□□ 11.8
XRN2Q9H0D6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.392e-6■■□□□ 11.8
XRN2Q9H0D6 SLC17A9-204ENST00000459704 2015 ntTSL 317.05■□□□□ 0.322e-13■■□□□ 11.8
XRN2Q9H0D6 SLC17A9-205ENST00000483113 1624 ntTSL 316.18■□□□□ 0.182e-13■■□□□ 11.8
XRN2Q9H0D6 MLST8-229ENST00000567928 545 ntTSL 230.5■■■□□ 2.472e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.04■■■□□ 2.242e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-226ENST00000566835 1565 ntTSL 228.84■■■□□ 2.212e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-220ENST00000565269 576 ntTSL 428.6■■■□□ 2.172e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-218ENST00000564679 589 ntTSL 228.46■■■□□ 2.152e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-227ENST00000567282 854 ntTSL 328■■■□□ 2.072e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.64■■■□□ 2.012e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-216ENST00000564294 1046 ntTSL 226.59■■□□□ 1.852e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-230ENST00000568194 2116 ntTSL 1 (best)23.99■■□□□ 1.432e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-225ENST00000566653 584 ntTSL 223.35■■□□□ 1.332e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-212ENST00000563067 1646 ntTSL 522.43■■□□□ 1.182e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.832e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.832e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-209ENST00000562479 581 ntTSL 320.2■□□□□ 0.822e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.812e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-221ENST00000565330 1403 ntTSL 220.05■□□□□ 0.82e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-231ENST00000568542 1865 ntTSL 1 (best)18.54■□□□□ 0.562e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-211ENST00000562851 575 ntTSL 417.46■□□□□ 0.392e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-235ENST00000570224 1044 ntTSL 316.65■□□□□ 0.262e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.53■□□□□ 0.082e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-207ENST00000562352 939 ntTSL 315.26■□□□□ 0.032e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-204ENST00000561651 703 ntTSL 214.98□□□□□ -0.012e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-222ENST00000565687 1135 ntTSL 514.98□□□□□ -0.012e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-213ENST00000563107 733 ntTSL 514.96□□□□□ -0.012e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-223ENST00000565717 947 ntTSL 514.69□□□□□ -0.062e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-233ENST00000569457 792 ntTSL 514.58□□□□□ -0.082e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-217ENST00000564319 557 ntTSL 413.48□□□□□ -0.252e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-210ENST00000562844 575 ntTSL 413.33□□□□□ -0.282e-9■■□□□ 11.8
XRN2Q9H0D6 MLST8-228ENST00000567623 855 ntTSL 312.59□□□□□ -0.392e-9■■□□□ 11.8
XRN2Q9H0D6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.042e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.45■■□□□ 1.55e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.555e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.495e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.485e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.445e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-224ENST00000584460 1855 ntTSL 217.45■□□□□ 0.385e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.18■□□□□ 0.345e-6■■□□□ 11.8
XRN2Q9H0D6 AKT2-201ENST00000311278 1393 ntTSL 1 (best) BASIC13.14□□□□□ -0.314e-6■■□□□ 11.8
XRN2Q9H0D6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.778e-7■■□□□ 11.8
XRN2Q9H0D6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.138e-7■■□□□ 11.8
XRN2Q9H0D6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.82■□□□□ 0.122e-6■■□□□ 11.8
XRN2Q9H0D6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.132e-6■■□□□ 11.8
XRN2Q9H0D6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.128e-7■■□□□ 11.8
XRN2Q9H0D6 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC15.39■□□□□ 0.051e-9■■□□□ 11.8
XRN2Q9H0D6 SYNJ2-206ENST00000485863 810 ntTSL 322.93■■□□□ 1.266e-7■■□□□ 11.8
XRN2Q9H0D6 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.462e-7■■□□□ 11.8
XRN2Q9H0D6 FAM208B-210ENST00000496681 522 ntTSL 328.24■■■□□ 2.112e-6■■□□□ 11.8
XRN2Q9H0D6 FAM208B-207ENST00000480839 540 ntTSL 323.02■■□□□ 1.282e-6■■□□□ 11.8
XRN2Q9H0D6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.155e-7■■□□□ 11.7
XRN2Q9H0D6 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC12.57□□□□□ -0.45e-7■■□□□ 11.7
XRN2Q9H0D6 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.35□□□□□ -0.435e-7■■□□□ 11.7
XRN2Q9H0D6 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.895e-7■■□□□ 11.7
XRN2Q9H0D6 MVD-205ENST00000562981 537 ntTSL 220.18■□□□□ 0.822e-16■■□□□ 11.7
XRN2Q9H0D6 NECAB3-222ENST00000607805 969 ntTSL 525.82■■□□□ 1.721e-6■■□□□ 11.7
XRN2Q9H0D6 NECAB3-211ENST00000485399 1373 ntTSL 224.48■■□□□ 1.511e-6■■□□□ 11.7
XRN2Q9H0D6 NECAB3-215ENST00000494174 859 ntTSL 523.15■■□□□ 1.31e-6■■□□□ 11.7
XRN2Q9H0D6 NECAB3-220ENST00000606699 1022 ntTSL 222.82■■□□□ 1.241e-6■■□□□ 11.7
XRN2Q9H0D6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.54■■□□□ 1.21e-6■■□□□ 11.7
XRN2Q9H0D6 NECAB3-213ENST00000488489 2142 ntTSL 221.4■■□□□ 1.021e-6■■□□□ 11.7
XRN2Q9H0D6 NECAB3-214ENST00000493590 625 ntTSL 521■□□□□ 0.951e-6■■□□□ 11.7
XRN2Q9H0D6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.881e-6■■□□□ 11.7
XRN2Q9H0D6 NECAB3-203ENST00000439478 925 ntTSL 517.45■□□□□ 0.381e-6■■□□□ 11.7
XRN2Q9H0D6 NECAB3-219ENST00000606690 900 ntTSL 517.45■□□□□ 0.381e-6■■□□□ 11.7
XRN2Q9H0D6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.362e-6■■□□□ 11.7
XRN2Q9H0D6 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.02□□□□□ -0.164e-6■■□□□ 11.7
XRN2Q9H0D6 TSPEAR-AS1-201ENST00000430181 374 ntTSL 311.17□□□□□ -0.624e-6■■□□□ 11.7
XRN2Q9H0D6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.852e-6■■□□□ 11.7
XRN2Q9H0D6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.16■■■□□ 2.422e-6■■□□□ 11.7
XRN2Q9H0D6 WBP1-207ENST00000466835 739 ntTSL 529.36■■■□□ 2.292e-6■■□□□ 11.7
XRN2Q9H0D6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.172e-6■■□□□ 11.7
XRN2Q9H0D6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.56■■■□□ 2.162e-6■■□□□ 11.7
XRN2Q9H0D6 WBP1-204ENST00000428943 989 ntTSL 528.21■■■□□ 2.112e-6■■□□□ 11.7
XRN2Q9H0D6 IL4R-216ENST00000566117 529 ntTSL 527.84■■■□□ 2.054e-6■■□□□ 11.7
XRN2Q9H0D6 WBP1-205ENST00000464774 597 ntTSL 527.65■■■□□ 2.022e-6■■□□□ 11.7
XRN2Q9H0D6 WBP1-209ENST00000473467 847 ntTSL 227.46■■□□□ 1.992e-6■■□□□ 11.7
XRN2Q9H0D6 SHARPIN-201ENST00000359551 1687 ntTSL 1 (best)27.32■■□□□ 1.962e-6■■□□□ 11.7
XRN2Q9H0D6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.11■■□□□ 1.932e-6■■□□□ 11.7
XRN2Q9H0D6 WBP1-206ENST00000466303 817 ntTSL 327.1■■□□□ 1.932e-6■■□□□ 11.7
XRN2Q9H0D6 MGAT1-214ENST00000507384 572 ntTSL 426.68■■□□□ 1.862e-6■■□□□ 11.7
XRN2Q9H0D6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.832e-6■■□□□ 11.7
XRN2Q9H0D6 WBP1-210ENST00000474185 582 ntTSL 326.1■■□□□ 1.772e-6■■□□□ 11.7
XRN2Q9H0D6 WDR1-209ENST00000505851 715 ntTSL 226.04■■□□□ 1.762e-6■■□□□ 11.7
XRN2Q9H0D6 WBP1-214ENST00000494741 1069 ntTSL 325.8■■□□□ 1.722e-6■■□□□ 11.7
XRN2Q9H0D6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.59■■□□□ 1.692e-6■■□□□ 11.7
XRN2Q9H0D6 RSAD1-208ENST00000515221 1029 ntTSL 225.02■■□□□ 1.62e-6■■□□□ 11.7
XRN2Q9H0D6 SLC25A43-204ENST00000493093 896 ntTSL 324.4■■□□□ 1.52e-6■■□□□ 11.7
XRN2Q9H0D6 PISD-215ENST00000479851 655 ntTSL 324.28■■□□□ 1.482e-6■■□□□ 11.7
XRN2Q9H0D6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.322e-6■■□□□ 11.7
XRN2Q9H0D6 DEAF1-210ENST00000529717 705 ntTSL 522.94■■□□□ 1.262e-6■■□□□ 11.7
XRN2Q9H0D6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.07■■□□□ 1.122e-6■■□□□ 11.7
Retrieved 100 of 21,068 protein–RNA pairs in 146.3 ms