Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 AC012569.1-201ENST00000591191 1524 ntBASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 MRPL20P1-201ENST00000400819 433 ntBASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 LINC02447-202ENST00000501888 2146 ntBASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO3Q9BXY4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 AC005622.1-201ENST00000636801 1703 ntBASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 RNU1-129P-201ENST00000384064 167 ntBASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 AC092910.1-201ENST00000482027 1129 ntBASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 U1.21-201ENST00000580816 167 ntBASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 MIR4515-201ENST00000584082 81 ntBASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 AC116407.3-201ENST00000623905 1129 ntBASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO3Q9BXY4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms