Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16■□□□□ 0.15
THUMPD3Q9BV44 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16■□□□□ 0.15
THUMPD3Q9BV44 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16■□□□□ 0.15
THUMPD3Q9BV44 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16■□□□□ 0.15
THUMPD3Q9BV44 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
THUMPD3Q9BV44 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THUMPD3Q9BV44 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
THUMPD3Q9BV44 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THUMPD3Q9BV44 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16■□□□□ 0.15
THUMPD3Q9BV44 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 DUX4L17-201ENST00000557360 1267 ntBASIC16■□□□□ 0.15
THUMPD3Q9BV44 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16■□□□□ 0.15
THUMPD3Q9BV44 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THUMPD3Q9BV44 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
THUMPD3Q9BV44 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16■□□□□ 0.15
THUMPD3Q9BV44 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16■□□□□ 0.15
THUMPD3Q9BV44 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THUMPD3Q9BV44 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 NUS1P2-201ENST00000417358 873 ntBASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 AC138894.3-201ENST00000603787 634 ntBASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 AC114341.1-201ENST00000618070 349 ntBASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.99■□□□□ 0.15
THUMPD3Q9BV44 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
THUMPD3Q9BV44 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
THUMPD3Q9BV44 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
THUMPD3Q9BV44 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.98■□□□□ 0.15
THUMPD3Q9BV44 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
THUMPD3Q9BV44 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
THUMPD3Q9BV44 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
THUMPD3Q9BV44 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms