Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 AC006449.5-201ENST00000610658 2098 ntBASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 FRMD8P1-201ENST00000440433 1524 ntBASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 ACTG1P4-201ENST00000425123 1122 ntBASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 AC124947.2-201ENST00000547118 1133 ntBASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 SBF1P1-201ENST00000444527 5631 ntBASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHRDL1Q9BU40 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 AC008741.2-201ENST00000612792 3115 ntBASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 TSPY19P-201ENST00000418461 509 ntBASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 LINC00982-205ENST00000420957 435 ntBASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 TSPY18P-201ENST00000441642 509 ntBASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.3□□□□□ -0.28
CHRDL1Q9BU40 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms