Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.79■□□□□ 0.44
YME1L1Q96TA2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.79■□□□□ 0.44
YME1L1Q96TA2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
YME1L1Q96TA2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YME1L1Q96TA2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.79■□□□□ 0.44
YME1L1Q96TA2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
YME1L1Q96TA2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.79■□□□□ 0.44
YME1L1Q96TA2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
YME1L1Q96TA2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.78■□□□□ 0.44
YME1L1Q96TA2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 DOC2GP-202ENST00000514950 1163 ntBASIC17.78■□□□□ 0.44
YME1L1Q96TA2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 AC010336.2-201ENST00000564226 506 ntBASIC17.78■□□□□ 0.44
YME1L1Q96TA2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.78■□□□□ 0.44
YME1L1Q96TA2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 SPDYE19P-201ENST00000338590 713 ntBASIC17.77■□□□□ 0.44
YME1L1Q96TA2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 AC008494.3-201ENST00000606615 944 ntBASIC17.77■□□□□ 0.44
YME1L1Q96TA2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
YME1L1Q96TA2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
YME1L1Q96TA2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
YME1L1Q96TA2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
YME1L1Q96TA2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
YME1L1Q96TA2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
YME1L1Q96TA2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
YME1L1Q96TA2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
YME1L1Q96TA2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
YME1L1Q96TA2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 AC093004.1-201ENST00000508850 424 ntBASIC17.76■□□□□ 0.43
YME1L1Q96TA2 ZNF890P-202ENST00000530367 1156 ntBASIC17.76■□□□□ 0.43
YME1L1Q96TA2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 AC135050.7-201ENST00000624508 2218 ntBASIC17.76■□□□□ 0.43
YME1L1Q96TA2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
YME1L1Q96TA2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YME1L1Q96TA2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms