Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX18Q96RF0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX18Q96RF0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX18Q96RF0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX18Q96RF0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX18Q96RF0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 AL365203.3-201ENST00000609742 2057 ntBASIC15.25■□□□□ 0.03
SNX18Q96RF0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX18Q96RF0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNX18Q96RF0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 PRYP5-201ENST00000451909 266 ntBASIC15.25■□□□□ 0.03
SNX18Q96RF0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 DUX4L17-201ENST00000557360 1267 ntBASIC15.25■□□□□ 0.03
SNX18Q96RF0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 MIR5100-201ENST00000579544 119 ntBASIC15.25■□□□□ 0.03
SNX18Q96RF0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX18Q96RF0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX18Q96RF0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX18Q96RF0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX18Q96RF0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SNX18Q96RF0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX18Q96RF0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX18Q96RF0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX18Q96RF0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX18Q96RF0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX18Q96RF0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SNX18Q96RF0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SNX18Q96RF0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.24■□□□□ 0.03
SNX18Q96RF0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX18Q96RF0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 AL031008.1-201ENST00000619963 541 ntBASIC15.24■□□□□ 0.03
SNX18Q96RF0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SNX18Q96RF0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SNX18Q96RF0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SNX18Q96RF0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX18Q96RF0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX18Q96RF0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SNX18Q96RF0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX18Q96RF0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX18Q96RF0 AL021920.2-201ENST00000624828 1351 ntBASIC15.24■□□□□ 0.03
SNX18Q96RF0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX18Q96RF0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SNX18Q96RF0 NUS1P2-201ENST00000417358 873 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms