Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 MPRIPP1-201ENST00000452433 1089 ntBASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 IGHV3-52-201ENST00000519770 353 ntBASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 AC011676.5-201ENST00000624864 2660 ntBASIC14□□□□□ -0.17
CSMD1Q96PZ7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 AL589987.1-201ENST00000453380 819 ntBASIC14□□□□□ -0.17
CSMD1Q96PZ7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 AC108860.2-201ENST00000562760 2183 ntBASIC14□□□□□ -0.17
CSMD1Q96PZ7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 AGER-203ENST00000375065 665 ntTSL 2 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 CHMP4BP1-201ENST00000556017 588 ntBASIC14□□□□□ -0.17
CSMD1Q96PZ7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD1Q96PZ7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CSMD1Q96PZ7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AC005412.3-201ENST00000580309 715 ntBASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 MIR5572-201ENST00000583188 137 ntBASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 PCDHB18P-201ENST00000524813 2368 ntBASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 LINC00895-201ENST00000629028 1637 ntBASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 RPL7P3-201ENST00000441388 714 ntBASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 BCRP2-202ENST00000447763 634 ntBASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AC007551.1-201ENST00000457394 519 ntBASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 RPL13AP20-201ENST00000459725 609 ntBASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 BCRP6-201ENST00000510112 632 ntBASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 BCRP7-201ENST00000511549 544 ntBASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms