Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.7■□□□□ 0.74
NEK1Q96PY6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.7■□□□□ 0.74
NEK1Q96PY6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.7■□□□□ 0.74
NEK1Q96PY6 CYP2T1P-202ENST00000641596 2535 ntBASIC19.7■□□□□ 0.74
NEK1Q96PY6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.7■□□□□ 0.74
NEK1Q96PY6 AC018845.2-201ENST00000568326 409 ntBASIC19.7■□□□□ 0.74
NEK1Q96PY6 AL031055.1-201ENST00000606362 631 ntBASIC19.7■□□□□ 0.74
NEK1Q96PY6 AC120114.3-201ENST00000611923 658 ntBASIC19.7■□□□□ 0.74
NEK1Q96PY6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NEK1Q96PY6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.7■□□□□ 0.74
NEK1Q96PY6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.7■□□□□ 0.74
NEK1Q96PY6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEK1Q96PY6 ZNF259P1-201ENST00000407656 1365 ntBASIC19.7■□□□□ 0.74
NEK1Q96PY6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NEK1Q96PY6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEK1Q96PY6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 DOC2GP-204ENST00000639052 2548 ntBASIC19.69■□□□□ 0.74
NEK1Q96PY6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEK1Q96PY6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEK1Q96PY6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEK1Q96PY6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEK1Q96PY6 AC106730.1-201ENST00000566722 1090 ntBASIC19.69■□□□□ 0.74
NEK1Q96PY6 MIR3909-201ENST00000579518 119 ntBASIC19.69■□□□□ 0.74
NEK1Q96PY6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 AC004877.2-201ENST00000623941 599 ntBASIC19.69■□□□□ 0.74
NEK1Q96PY6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEK1Q96PY6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEK1Q96PY6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEK1Q96PY6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEK1Q96PY6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.69■□□□□ 0.74
NEK1Q96PY6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEK1Q96PY6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEK1Q96PY6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEK1Q96PY6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEK1Q96PY6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 AC025580.3-201ENST00000617932 1424 ntBASIC19.68■□□□□ 0.74
NEK1Q96PY6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEK1Q96PY6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEK1Q96PY6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NEK1Q96PY6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEK1Q96PY6 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEK1Q96PY6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEK1Q96PY6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NEK1Q96PY6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 BCAR1-209ENST00000546196 1340 ntBASIC19.68■□□□□ 0.74
NEK1Q96PY6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEK1Q96PY6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NEK1Q96PY6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEK1Q96PY6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms