Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 BX842568.4-201ENST00000421222 227 ntBASIC13.83□□□□□ -0.2
GAFA1Q96PS6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 ALG1L5P-201ENST00000482043 771 ntBASIC13.83□□□□□ -0.2
GAFA1Q96PS6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 AC020765.3-201ENST00000613051 740 ntBASIC13.83□□□□□ -0.2
GAFA1Q96PS6 C20orf181-201ENST00000623918 480 ntBASIC13.83□□□□□ -0.2
GAFA1Q96PS6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 AC099398.1-201ENST00000567919 2776 ntBASIC13.83□□□□□ -0.2
GAFA1Q96PS6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GAFA1Q96PS6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 AC016027.1-202ENST00000607927 1699 ntBASIC13.82□□□□□ -0.2
GAFA1Q96PS6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 DNAJB3-201ENST00000446806 729 ntBASIC13.82□□□□□ -0.2
GAFA1Q96PS6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 AC092902.6-201ENST00000641783 218 ntBASIC13.82□□□□□ -0.2
GAFA1Q96PS6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GAFA1Q96PS6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms