Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 OR6D1P-202ENST00000641007 5290 ntBASIC17.53■□□□□ 0.4
SUSD3Q96L08 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SUSD3Q96L08 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SUSD3Q96L08 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SUSD3Q96L08 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.52■□□□□ 0.4
SUSD3Q96L08 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SUSD3Q96L08 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SUSD3Q96L08 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.52■□□□□ 0.39
SUSD3Q96L08 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SUSD3Q96L08 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SUSD3Q96L08 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SUSD3Q96L08 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SUSD3Q96L08 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.52■□□□□ 0.39
SUSD3Q96L08 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SUSD3Q96L08 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SUSD3Q96L08 AL589702.1-201ENST00000641229 1509 ntBASIC17.52■□□□□ 0.39
SUSD3Q96L08 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
SUSD3Q96L08 AC078925.2-201ENST00000624013 1973 ntBASIC17.51■□□□□ 0.39
SUSD3Q96L08 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 AC241585.1-201ENST00000433527 519 ntBASIC17.51■□□□□ 0.39
SUSD3Q96L08 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 SPDYE12P-201ENST00000618416 771 ntBASIC17.51■□□□□ 0.39
SUSD3Q96L08 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.51■□□□□ 0.39
SUSD3Q96L08 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUSD3Q96L08 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SUSD3Q96L08 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUSD3Q96L08 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUSD3Q96L08 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SUSD3Q96L08 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUSD3Q96L08 PCGF3-213ENST00000620529 1899 ntBASIC17.5■□□□□ 0.39
SUSD3Q96L08 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUSD3Q96L08 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SUSD3Q96L08 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUSD3Q96L08 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUSD3Q96L08 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms