Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 AC009078.2-202ENST00000463353 338 ntBASIC16.32■□□□□ 0.2
ATL1Q8WXF7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 UNC93B6-202ENST00000528242 690 ntBASIC16.32■□□□□ 0.2
ATL1Q8WXF7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 CYP2A7P1-201ENST00000595391 815 ntBASIC16.32■□□□□ 0.2
ATL1Q8WXF7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATL1Q8WXF7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 SLC22A20-204ENST00000530038 1673 ntBASIC16.31■□□□□ 0.2
ATL1Q8WXF7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 VN2R19P-201ENST00000442399 1052 ntBASIC16.31■□□□□ 0.2
ATL1Q8WXF7 AC009947.1-201ENST00000444350 727 ntBASIC16.31■□□□□ 0.2
ATL1Q8WXF7 CXCL1P1-201ENST00000502804 216 ntBASIC16.31■□□□□ 0.2
ATL1Q8WXF7 RNA5SP415-201ENST00000517246 115 ntBASIC16.31■□□□□ 0.2
ATL1Q8WXF7 IGHV3-22-201ENST00000520721 359 ntBASIC16.31■□□□□ 0.2
ATL1Q8WXF7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 OR7E47P-204ENST00000575924 449 ntBASIC16.31■□□□□ 0.2
ATL1Q8WXF7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.31■□□□□ 0.2
ATL1Q8WXF7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 AC079776.4-201ENST00000511039 504 ntBASIC16.3■□□□□ 0.2
ATL1Q8WXF7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.3■□□□□ 0.2
ATL1Q8WXF7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
ATL1Q8WXF7 AC012569.1-201ENST00000591191 1524 ntBASIC16.29■□□□□ 0.2
ATL1Q8WXF7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATL1Q8WXF7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms