Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PGM5P2-202ENST00000637225 1043 ntBASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 AC131009.4-201ENST00000624048 1740 ntBASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 AC018712.1-201ENST00000455767 687 ntBASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 AC008667.4-201ENST00000607370 168 ntBASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 AL691432.3-201ENST00000621860 400 ntBASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRAF3IP1Q8TDR0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.38
TRAF3IP1Q8TDR0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAF3IP1Q8TDR0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 RN7SL510P-201ENST00000581311 263 ntBASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 AP001350.2-201ENST00000625104 1094 ntBASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 ALOX12P2-203ENST00000570921 1945 ntBASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRAF3IP1Q8TDR0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.38■□□□□ 0.37
TRAF3IP1Q8TDR0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAF3IP1Q8TDR0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRAF3IP1Q8TDR0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP1Q8TDR0 AL353732.1-201ENST00000569618 1459 ntBASIC17.38■□□□□ 0.37
TRAF3IP1Q8TDR0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP1Q8TDR0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP1Q8TDR0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAF3IP1Q8TDR0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TRAF3IP1Q8TDR0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP1Q8TDR0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAF3IP1Q8TDR0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP1Q8TDR0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms