Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC9.15□□□□□ -0.95
SPTSSBQ8NFR3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 AC135279.3-201ENST00000610945 1311 ntBASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 PCDHA5-203ENST00000614258 4248 ntBASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 ESR1-207ENST00000440973 6466 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 UNC93B3-201ENST00000308076 687 ntBASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 AL136162.1-201ENST00000607711 1078 ntBASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
SPTSSBQ8NFR3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms