Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 MTHFR-217ENST00000641820 1569 ntBASIC16.26■□□□□ 0.19
HIPK4Q8NE63 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 FRMD8P1-201ENST00000440433 1524 ntBASIC16.26■□□□□ 0.19
HIPK4Q8NE63 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 AC007967.3-201ENST00000434308 558 ntBASIC16.26■□□□□ 0.19
HIPK4Q8NE63 KRT18P57-201ENST00000443599 1254 ntBASIC16.26■□□□□ 0.19
HIPK4Q8NE63 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 GUSBP12-201ENST00000513727 720 ntBASIC16.26■□□□□ 0.19
HIPK4Q8NE63 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 AC006011.2-201ENST00000621313 1158 ntBASIC16.26■□□□□ 0.19
HIPK4Q8NE63 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK4Q8NE63 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 ME2P1-201ENST00000426028 1970 ntBASIC16.24■□□□□ 0.19
HIPK4Q8NE63 PRAL-201ENST00000624952 3286 ntBASIC16.24■□□□□ 0.19
HIPK4Q8NE63 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms