Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.08■□□□□ 0.33
ATPAF2Q8N5M1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATPAF2Q8N5M1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATPAF2Q8N5M1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATPAF2Q8N5M1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATPAF2Q8N5M1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.08■□□□□ 0.33
ATPAF2Q8N5M1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATPAF2Q8N5M1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 MIR940-201ENST00000401276 94 ntBASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ATPAF2Q8N5M1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 AL118508.1-201ENST00000613502 2345 ntBASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 KRT18P58-201ENST00000527480 1120 ntBASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 GGT4P-201ENST00000623672 1708 ntBASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 GGT3P-204ENST00000453783 1664 ntBASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.07■□□□□ 0.32
ATPAF2Q8N5M1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ATPAF2Q8N5M1 MIR3909-201ENST00000579518 119 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms