Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 SPCS2P1-201ENST00000561636 679 ntBASIC25.76■■□□□ 1.71
VPS8Q8N3P4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 AC005622.1-201ENST00000636801 1703 ntBASIC25.76■■□□□ 1.71
VPS8Q8N3P4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC25.76■■□□□ 1.71
VPS8Q8N3P4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 U82695.1-201ENST00000635752 1889 ntBASIC25.75■■□□□ 1.71
VPS8Q8N3P4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 AL353705.2-201ENST00000428243 662 ntBASIC25.75■■□□□ 1.71
VPS8Q8N3P4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 AC069120.2-201ENST00000524091 540 ntBASIC25.75■■□□□ 1.71
VPS8Q8N3P4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
VPS8Q8N3P4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
VPS8Q8N3P4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS8Q8N3P4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC25.74■■□□□ 1.71
VPS8Q8N3P4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC25.74■■□□□ 1.71
VPS8Q8N3P4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC25.74■■□□□ 1.71
VPS8Q8N3P4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC25.74■■□□□ 1.71
VPS8Q8N3P4 MIR4321-201ENST00000592276 80 ntBASIC25.74■■□□□ 1.71
VPS8Q8N3P4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
VPS8Q8N3P4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS8Q8N3P4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
VPS8Q8N3P4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
VPS8Q8N3P4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
VPS8Q8N3P4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC25.74■■□□□ 1.71
VPS8Q8N3P4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
VPS8Q8N3P4 PRORSD1P-202ENST00000563365 2154 ntBASIC25.74■■□□□ 1.71
VPS8Q8N3P4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
VPS8Q8N3P4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 AC009053.2-201ENST00000563701 2365 ntBASIC25.73■■□□□ 1.71
VPS8Q8N3P4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC25.73■■□□□ 1.71
VPS8Q8N3P4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC25.73■■□□□ 1.71
VPS8Q8N3P4 MIR770-201ENST00000390219 98 ntBASIC25.72■■□□□ 1.71
VPS8Q8N3P4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC25.72■■□□□ 1.71
VPS8Q8N3P4 AC245100.5-201ENST00000452108 331 ntBASIC25.72■■□□□ 1.71
VPS8Q8N3P4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC25.72■■□□□ 1.71
VPS8Q8N3P4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
VPS8Q8N3P4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC25.72■■□□□ 1.71
VPS8Q8N3P4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
VPS8Q8N3P4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
VPS8Q8N3P4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC25.72■■□□□ 1.71
VPS8Q8N3P4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
VPS8Q8N3P4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
VPS8Q8N3P4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC25.72■■□□□ 1.71
VPS8Q8N3P4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC25.72■■□□□ 1.71
VPS8Q8N3P4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
VPS8Q8N3P4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 AC105021.1-202ENST00000570572 669 ntBASIC25.71■■□□□ 1.71
VPS8Q8N3P4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 AC024267.1-201ENST00000582320 895 ntBASIC25.71■■□□□ 1.71
VPS8Q8N3P4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms