Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 AC025678.2-201ENST00000562061 970 ntBASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 LINC01225-203ENST00000563550 1244 ntBASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 AL138918.1-201ENST00000568306 659 ntBASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
SCN4BQ8IWT1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 SNX33P1-201ENST00000592116 1762 ntBASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 KRT8P23-201ENST00000560090 1207 ntBASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 AC008267.7-201ENST00000624570 1194 ntBASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 KRT8P39-201ENST00000396270 1433 ntBASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCN4BQ8IWT1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 CYMP-203ENST00000474680 1263 ntBASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 SLC25A39P2-201ENST00000537614 270 ntBASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN4BQ8IWT1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.52■□□□□ 0.4
SCN4BQ8IWT1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms