Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AC138969.3-201ENST00000546612 1459 ntBASIC15.08■□□□□ 0
RP1L1Q8IWN7 AC138932.2-201ENST00000548268 1459 ntBASIC15.08■□□□□ 0
RP1L1Q8IWN7 AC126755.4-201ENST00000549796 1459 ntBASIC15.08■□□□□ 0
RP1L1Q8IWN7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.08■□□□□ 0
RP1L1Q8IWN7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.08■□□□□ 0
RP1L1Q8IWN7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RP1L1Q8IWN7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.08■□□□□ 0
RP1L1Q8IWN7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RP1L1Q8IWN7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RP1L1Q8IWN7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.08■□□□□ 0
RP1L1Q8IWN7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RP1L1Q8IWN7 KRT18P55-202ENST00000578578 1546 ntBASIC15.08■□□□□ 0
RP1L1Q8IWN7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RP1L1Q8IWN7 MIR346-201ENST00000362234 95 ntBASIC15.08■□□□□ 0
RP1L1Q8IWN7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.08■□□□□ 0
RP1L1Q8IWN7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.08■□□□□ 0
RP1L1Q8IWN7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.08■□□□□ 0
RP1L1Q8IWN7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.08■□□□□ 0
RP1L1Q8IWN7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RP1L1Q8IWN7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
RP1L1Q8IWN7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RP1L1Q8IWN7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RP1L1Q8IWN7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.08■□□□□ 0
RP1L1Q8IWN7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.08■□□□□ 0
RP1L1Q8IWN7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.08■□□□□ 0
RP1L1Q8IWN7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RP1L1Q8IWN7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RP1L1Q8IWN7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 IGHV3-42-201ENST00000520410 361 ntBASIC15.07■□□□□ 0
RP1L1Q8IWN7 MIR3909-201ENST00000579518 119 ntBASIC15.07■□□□□ 0
RP1L1Q8IWN7 AC027307.2-201ENST00000591252 911 ntBASIC15.07■□□□□ 0
RP1L1Q8IWN7 AL158211.3-201ENST00000607385 239 ntBASIC15.07■□□□□ 0
RP1L1Q8IWN7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 LINC00896-202ENST00000609602 2128 ntBASIC15.07■□□□□ 0
RP1L1Q8IWN7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 KRT17P7-201ENST00000451704 1104 ntBASIC15.07■□□□□ 0
RP1L1Q8IWN7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 API5-211ENST00000534695 560 ntTSL 5 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.07■□□□□ 0
RP1L1Q8IWN7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RP1L1Q8IWN7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.06■□□□□ 0
RP1L1Q8IWN7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.06■□□□□ 0
RP1L1Q8IWN7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RP1L1Q8IWN7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.06■□□□□ 0
RP1L1Q8IWN7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.06■□□□□ 0
RP1L1Q8IWN7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.06■□□□□ 0
RP1L1Q8IWN7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.06■□□□□ 0
RP1L1Q8IWN7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.06■□□□□ 0
RP1L1Q8IWN7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
RP1L1Q8IWN7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RP1L1Q8IWN7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RP1L1Q8IWN7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RP1L1Q8IWN7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms