Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ALOX12P2-203ENST00000570921 1945 ntBASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 KRT8P49-201ENST00000604166 1432 ntBASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 NKAPP1-205ENST00000585790 367 ntBASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC50Q8IVM0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 UPK3BP1-201ENST00000428678 509 ntBASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 AC106795.1-205ENST00000512851 1056 ntBASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 AL139288.1-201ENST00000623748 933 ntBASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 AC105917.1-201ENST00000506637 2539 ntBASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 AC023824.1-201ENST00000562945 2975 ntBASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC50Q8IVM0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 LINC00895-201ENST00000629028 1637 ntBASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 AC099063.4-201ENST00000641099 1602 ntBASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 RBM17P3-201ENST00000417687 1192 ntBASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 HCG4P8-203ENST00000443049 980 ntBASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 PRYP5-201ENST00000451909 266 ntBASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 MIR3652-201ENST00000579335 131 ntBASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC50Q8IVM0 MTDHP3-201ENST00000594186 672 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms