Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.76■□□□□ 0.27
LYSMD3Q7Z3D4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 RNU1-129P-201ENST00000384064 167 ntBASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 AC004832.2-201ENST00000426397 482 ntBASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 U1.21-201ENST00000580816 167 ntBASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 AC068137.2-201ENST00000605408 478 ntBASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 AL031055.1-201ENST00000606362 631 ntBASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 KRT8P39-201ENST00000396270 1433 ntBASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 MST1L-201ENST00000442552 2185 ntBASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD3Q7Z3D4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 AC006538.1-201ENST00000567905 1585 ntBASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD3Q7Z3D4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 DOC2GP-204ENST00000639052 2548 ntBASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 AL512652.2-201ENST00000625156 1716 ntBASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms