Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBA1AQ71U36 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TUBA1AQ71U36 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
TUBA1AQ71U36 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.46■□□□□ 0.06
TUBA1AQ71U36 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TUBA1AQ71U36 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TUBA1AQ71U36 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
TUBA1AQ71U36 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 AC006538.1-201ENST00000567905 1585 ntBASIC15.45■□□□□ 0.06
TUBA1AQ71U36 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 SLC25A1P3-201ENST00000395415 828 ntBASIC15.45■□□□□ 0.06
TUBA1AQ71U36 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 AC132008.2-207ENST00000454517 770 ntBASIC15.45■□□□□ 0.06
TUBA1AQ71U36 EMBP1-201ENST00000458200 901 ntBASIC15.45■□□□□ 0.06
TUBA1AQ71U36 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 AL139327.4-201ENST00000612362 153 ntBASIC15.45■□□□□ 0.06
TUBA1AQ71U36 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TUBA1AQ71U36 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 BX276092.7-203ENST00000637198 1536 ntBASIC15.44■□□□□ 0.06
TUBA1AQ71U36 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 LINC01711-201ENST00000598340 967 ntBASIC15.44■□□□□ 0.06
TUBA1AQ71U36 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.44■□□□□ 0.06
TUBA1AQ71U36 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms