Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAPH1Q70E73 KRT16P4-201ENST00000453883 522 ntBASIC16.82■□□□□ 0.28
RAPH1Q70E73 AC132008.2-207ENST00000454517 770 ntBASIC16.82■□□□□ 0.28
RAPH1Q70E73 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAPH1Q70E73 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 AC093458.2-201ENST00000623150 629 ntBASIC16.82■□□□□ 0.28
RAPH1Q70E73 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAPH1Q70E73 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAPH1Q70E73 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAPH1Q70E73 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAPH1Q70E73 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAPH1Q70E73 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAPH1Q70E73 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAPH1Q70E73 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
RAPH1Q70E73 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAPH1Q70E73 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
RAPH1Q70E73 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAPH1Q70E73 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RAPH1Q70E73 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RAPH1Q70E73 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.81■□□□□ 0.28
RAPH1Q70E73 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAPH1Q70E73 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.81■□□□□ 0.28
RAPH1Q70E73 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.81■□□□□ 0.28
RAPH1Q70E73 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 AL590787.1-201ENST00000568856 1315 ntBASIC16.81■□□□□ 0.28
RAPH1Q70E73 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.81■□□□□ 0.28
RAPH1Q70E73 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.81■□□□□ 0.28
RAPH1Q70E73 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 AP001269.4-201ENST00000609611 512 ntBASIC16.81■□□□□ 0.28
RAPH1Q70E73 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.81■□□□□ 0.28
RAPH1Q70E73 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.81■□□□□ 0.28
RAPH1Q70E73 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAPH1Q70E73 AC022188.1-201ENST00000620960 1664 ntBASIC16.81■□□□□ 0.28
RAPH1Q70E73 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAPH1Q70E73 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.81■□□□□ 0.28
RAPH1Q70E73 AC006538.1-201ENST00000567905 1585 ntBASIC16.81■□□□□ 0.28
RAPH1Q70E73 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 PAUPAR-201ENST00000630360 2965 ntBASIC16.8■□□□□ 0.28
RAPH1Q70E73 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 NCF1C-201ENST00000438382 1427 ntBASIC16.8■□□□□ 0.28
RAPH1Q70E73 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 HLA-J-202ENST00000469281 1241 ntBASIC16.8■□□□□ 0.28
RAPH1Q70E73 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 AL353135.1-201ENST00000606729 504 ntBASIC16.8■□□□□ 0.28
RAPH1Q70E73 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms