Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 FAM220BP-201ENST00000377689 816 ntBASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 SPTLC1P1-201ENST00000447199 261 ntBASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 HLA-V-204ENST00000476601 1289 ntBASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 KRT8P39-201ENST00000396270 1433 ntBASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 CU639417.3-201ENST00000624240 1404 ntBASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 AC073439.1-201ENST00000624121 1774 ntBASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC149Q6ZUS6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 AC098859.1-201ENST00000502915 1238 ntBASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC149Q6ZUS6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 AP002490.2-201ENST00000524791 560 ntBASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 PCDHB18P-201ENST00000524813 2368 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms