Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 GNRHR2-203ENST00000581100 1187 ntBASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 LINC01115-203ENST00000606068 577 ntBASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 RHOQP1-201ENST00000555758 579 ntBASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 AC011495.1-201ENST00000498085 584 ntBASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 Z97205.2-201ENST00000564697 1639 ntBASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 RNA5SP412-201ENST00000516234 123 ntBASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 FTH1P14-201ENST00000482930 551 ntBASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 CLUHP6-201ENST00000580789 941 ntBASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC10.98□□□□□ -0.65
VPS13DQ5THJ4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VPS13DQ5THJ4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms