Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AL512638.1-201ENST00000457493 794 ntBASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 AC004890.2-204ENST00000481968 304 ntBASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 AC027369.6-201ENST00000525520 931 ntBASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 AC007967.4-201ENST00000614700 386 ntBASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 SPTSSB-204ENST00000617024 1292 ntBASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 SPDYE12P-201ENST00000618416 771 ntBASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 AC073592.8-201ENST00000624126 511 ntBASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 AL512652.2-201ENST00000625156 1716 ntBASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 AC100757.3-201ENST00000622361 1406 ntBASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 AL645608.8-201ENST00000606034 2086 ntBASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 HLA-H-201ENST00000383620 1096 ntBASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 TSSK5P-201ENST00000423978 907 ntBASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 AC241585.1-201ENST00000433527 519 ntBASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 LINC02560-201ENST00000596379 459 ntBASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 AL138828.2-201ENST00000615812 383 ntBASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 AL590560.3-201ENST00000623350 461 ntBASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RNFT1Q5M7Z0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 MRPS18AP1-201ENST00000414458 589 ntBASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.92□□□□□ -0.02
RNFT1Q5M7Z0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms