Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 ARMC10P1-201ENST00000313754 855 ntBASIC12.84□□□□□ -0.35
HIST1H1AQ02539 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 POM121L3P-201ENST00000419331 1163 ntBASIC12.84□□□□□ -0.35
HIST1H1AQ02539 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 AP002490.2-201ENST00000524791 560 ntBASIC12.84□□□□□ -0.35
HIST1H1AQ02539 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 AC012615.1-201ENST00000565797 1299 ntBASIC12.84□□□□□ -0.35
HIST1H1AQ02539 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 AC092329.2-201ENST00000598402 547 ntBASIC12.84□□□□□ -0.35
HIST1H1AQ02539 AC091076.1-201ENST00000610741 619 ntBASIC12.84□□□□□ -0.35
HIST1H1AQ02539 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H1AQ02539 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H1AQ02539 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H1AQ02539 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
HIST1H1AQ02539 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H1AQ02539 AC104640.1-201ENST00000562617 2109 ntBASIC12.83□□□□□ -0.35
HIST1H1AQ02539 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H1AQ02539 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.83□□□□□ -0.35
HIST1H1AQ02539 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H1AQ02539 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H1AQ02539 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H1AQ02539 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.83□□□□□ -0.35
HIST1H1AQ02539 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
HIST1H1AQ02539 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 AL513523.2-202ENST00000427283 2040 ntBASIC12.83□□□□□ -0.36
HIST1H1AQ02539 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 CYP2T1P-202ENST00000641596 2535 ntBASIC12.83□□□□□ -0.36
HIST1H1AQ02539 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 AC138894.3-201ENST00000603787 634 ntBASIC12.83□□□□□ -0.36
HIST1H1AQ02539 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.83□□□□□ -0.36
HIST1H1AQ02539 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms