Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.92□□□□□ -0.5
UBE2D3P61077 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.92□□□□□ -0.5
UBE2D3P61077 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC11.92□□□□□ -0.5
UBE2D3P61077 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.92□□□□□ -0.5
UBE2D3P61077 OVCH1-AS1-204ENST00000641955 5529 ntBASIC11.92□□□□□ -0.5
UBE2D3P61077 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC11.92□□□□□ -0.5
UBE2D3P61077 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.92□□□□□ -0.5
UBE2D3P61077 AP005117.1-201ENST00000584346 1413 ntBASIC11.92□□□□□ -0.5
UBE2D3P61077 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.92□□□□□ -0.5
UBE2D3P61077 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
UBE2D3P61077 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.92□□□□□ -0.5
UBE2D3P61077 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.92□□□□□ -0.5
UBE2D3P61077 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.92□□□□□ -0.5
UBE2D3P61077 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.92□□□□□ -0.5
UBE2D3P61077 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.91□□□□□ -0.5
UBE2D3P61077 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC11.91□□□□□ -0.5
UBE2D3P61077 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11.91□□□□□ -0.5
UBE2D3P61077 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.91□□□□□ -0.5
UBE2D3P61077 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC11.91□□□□□ -0.5
UBE2D3P61077 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
UBE2D3P61077 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
UBE2D3P61077 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.91□□□□□ -0.5
UBE2D3P61077 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
UBE2D3P61077 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
UBE2D3P61077 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
UBE2D3P61077 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 HLA-J-202ENST00000469281 1241 ntBASIC11.91□□□□□ -0.5
UBE2D3P61077 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 AC138894.3-201ENST00000603787 634 ntBASIC11.91□□□□□ -0.5
UBE2D3P61077 AL353135.1-201ENST00000606729 504 ntBASIC11.91□□□□□ -0.5
UBE2D3P61077 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.91□□□□□ -0.5
UBE2D3P61077 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
UBE2D3P61077 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 KRT8P49-201ENST00000604166 1432 ntBASIC11.91□□□□□ -0.5
UBE2D3P61077 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
UBE2D3P61077 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC11.91□□□□□ -0.5
UBE2D3P61077 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D3P61077 AC243591.1-201ENST00000452967 1364 ntBASIC11.91□□□□□ -0.5
UBE2D3P61077 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D3P61077 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D3P61077 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
UBE2D3P61077 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
UBE2D3P61077 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
UBE2D3P61077 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D3P61077 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 AL590787.1-201ENST00000568856 1315 ntBASIC11.9□□□□□ -0.5
UBE2D3P61077 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D3P61077 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
UBE2D3P61077 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D3P61077 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D3P61077 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms