Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN2P57739 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN2P57739 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN2P57739 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CLDN2P57739 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN2P57739 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN2P57739 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN2P57739 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN2P57739 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLDN2P57739 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
CLDN2P57739 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLDN2P57739 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.39■□□□□ 0.21
CLDN2P57739 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN2P57739 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CLDN2P57739 AC080080.1-201ENST00000625121 2420 ntBASIC16.39■□□□□ 0.21
CLDN2P57739 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN2P57739 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN2P57739 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN2P57739 AC073439.1-201ENST00000624121 1774 ntBASIC16.39■□□□□ 0.21
CLDN2P57739 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN2P57739 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLDN2P57739 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN2P57739 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN2P57739 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN2P57739 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN2P57739 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLDN2P57739 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLDN2P57739 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN2P57739 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLDN2P57739 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.39■□□□□ 0.21
CLDN2P57739 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN2P57739 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.39■□□□□ 0.21
CLDN2P57739 AC097493.3-201ENST00000509725 367 ntBASIC16.39■□□□□ 0.21
CLDN2P57739 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN2P57739 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.39■□□□□ 0.21
CLDN2P57739 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.39■□□□□ 0.21
CLDN2P57739 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.39■□□□□ 0.21
CLDN2P57739 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN2P57739 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.39■□□□□ 0.21
CLDN2P57739 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLDN2P57739 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN2P57739 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN2P57739 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLDN2P57739 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLDN2P57739 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN2P57739 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN2P57739 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN2P57739 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN2P57739 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN2P57739 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN2P57739 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN2P57739 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN2P57739 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CLDN2P57739 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN2P57739 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN2P57739 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CLDN2P57739 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN2P57739 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN2P57739 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN2P57739 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.38■□□□□ 0.21
CLDN2P57739 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CLDN2P57739 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.38■□□□□ 0.21
CLDN2P57739 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN2P57739 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.38■□□□□ 0.21
CLDN2P57739 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 AC138761.1-201ENST00000584393 385 ntBASIC16.38■□□□□ 0.21
CLDN2P57739 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 AC018529.1-201ENST00000613063 361 ntBASIC16.38■□□□□ 0.21
CLDN2P57739 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CLDN2P57739 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN2P57739 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLDN2P57739 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLDN2P57739 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN2P57739 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN2P57739 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN2P57739 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CLDN2P57739 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLDN2P57739 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN2P57739 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CLDN2P57739 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN2P57739 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN2P57739 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CLDN2P57739 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN2P57739 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms