Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.89□□□□□ -0.03
GFRA1P56159 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
GFRA1P56159 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GFRA1P56159 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GFRA1P56159 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
GFRA1P56159 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GFRA1P56159 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
GFRA1P56159 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.88□□□□□ -0.03
GFRA1P56159 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.88□□□□□ -0.03
GFRA1P56159 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
GFRA1P56159 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 RBPMS2P1-201ENST00000437762 623 ntBASIC14.88□□□□□ -0.03
GFRA1P56159 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.88□□□□□ -0.03
GFRA1P56159 RFPL4AP1-201ENST00000530883 850 ntBASIC14.88□□□□□ -0.03
GFRA1P56159 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 AC025678.2-201ENST00000562061 970 ntBASIC14.88□□□□□ -0.03
GFRA1P56159 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.88□□□□□ -0.03
GFRA1P56159 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.88□□□□□ -0.03
GFRA1P56159 AC004449.1-201ENST00000564240 433 ntBASIC14.88□□□□□ -0.03
GFRA1P56159 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.88□□□□□ -0.03
GFRA1P56159 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.88□□□□□ -0.03
GFRA1P56159 AP001059.3-201ENST00000619053 235 ntBASIC14.88□□□□□ -0.03
GFRA1P56159 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.88□□□□□ -0.03
GFRA1P56159 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GFRA1P56159 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
GFRA1P56159 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 HLA-A-202ENST00000376806 1854 ntBASIC14.88□□□□□ -0.03
GFRA1P56159 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GFRA1P56159 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GFRA1P56159 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
GFRA1P56159 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
GFRA1P56159 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.87□□□□□ -0.03
GFRA1P56159 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GFRA1P56159 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
GFRA1P56159 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.87□□□□□ -0.03
GFRA1P56159 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.87□□□□□ -0.03
GFRA1P56159 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.87□□□□□ -0.03
GFRA1P56159 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.87□□□□□ -0.03
GFRA1P56159 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
GFRA1P56159 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
GFRA1P56159 SPDYE14P-201ENST00000442619 822 ntBASIC14.87□□□□□ -0.03
GFRA1P56159 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.87□□□□□ -0.03
GFRA1P56159 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.87□□□□□ -0.03
GFRA1P56159 AC027796.2-201ENST00000575326 344 ntBASIC14.87□□□□□ -0.03
GFRA1P56159 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.87□□□□□ -0.03
GFRA1P56159 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.87□□□□□ -0.03
GFRA1P56159 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.87□□□□□ -0.03
GFRA1P56159 AC015911.4-201ENST00000588022 1070 ntBASIC14.87□□□□□ -0.03
GFRA1P56159 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.87□□□□□ -0.03
GFRA1P56159 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.87□□□□□ -0.03
GFRA1P56159 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms