Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 AC211486.1-202ENST00000416371 468 ntBASIC18.19■□□□□ 0.5
NCKAP1LP55160 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 AP006288.1-201ENST00000446065 395 ntBASIC18.19■□□□□ 0.5
NCKAP1LP55160 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 SPDYE11-202ENST00000450699 704 ntBASIC18.19■□□□□ 0.5
NCKAP1LP55160 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 AC211476.1-201ENST00000503899 468 ntBASIC18.19■□□□□ 0.5
NCKAP1LP55160 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 SPDYE9P-201ENST00000570642 692 ntBASIC18.19■□□□□ 0.5
NCKAP1LP55160 SPDYE10P-202ENST00000612005 668 ntBASIC18.19■□□□□ 0.5
NCKAP1LP55160 SPDYE8P-202ENST00000612377 668 ntBASIC18.19■□□□□ 0.5
NCKAP1LP55160 LINC01144-201ENST00000626198 1710 ntBASIC18.19■□□□□ 0.5
NCKAP1LP55160 AL513210.1-201ENST00000629608 234 ntBASIC18.19■□□□□ 0.5
NCKAP1LP55160 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 ALOX12P2-203ENST00000570921 1945 ntBASIC18.19■□□□□ 0.5
NCKAP1LP55160 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1LP55160 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.19■□□□□ 0.5
NCKAP1LP55160 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.18■□□□□ 0.5
NCKAP1LP55160 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 SPCS2P4-201ENST00000436160 681 ntBASIC18.18■□□□□ 0.5
NCKAP1LP55160 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 TIMM8BP1-201ENST00000452384 211 ntBASIC18.18■□□□□ 0.5
NCKAP1LP55160 AC079140.1-201ENST00000508039 487 ntBASIC18.18■□□□□ 0.5
NCKAP1LP55160 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 AC022145.2-201ENST00000598203 171 ntBASIC18.18■□□□□ 0.5
NCKAP1LP55160 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 AC134684.3-201ENST00000641758 218 ntBASIC18.18■□□□□ 0.5
NCKAP1LP55160 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 ME2P1-201ENST00000426028 1970 ntBASIC18.18■□□□□ 0.5
NCKAP1LP55160 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
NCKAP1LP55160 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1LP55160 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NCKAP1LP55160 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1LP55160 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1LP55160 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.17■□□□□ 0.5
NCKAP1LP55160 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1LP55160 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
NCKAP1LP55160 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1LP55160 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1LP55160 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1LP55160 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1LP55160 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1LP55160 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1LP55160 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.17■□□□□ 0.5
NCKAP1LP55160 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
NCKAP1LP55160 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.17■□□□□ 0.5
NCKAP1LP55160 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
NCKAP1LP55160 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
NCKAP1LP55160 AC004967.1-201ENST00000453589 447 ntBASIC18.17■□□□□ 0.5
NCKAP1LP55160 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1LP55160 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NCKAP1LP55160 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NCKAP1LP55160 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms