Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 TUBB8P12-201ENST00000308911 1335 ntBASIC17.57■□□□□ 0.4
TUBP50607 TUBB7P-202ENST00000428444 1305 ntBASIC17.57■□□□□ 0.4
TUBP50607 TUBB8P7-204ENST00000567960 1332 ntBASIC17.57■□□□□ 0.4
TUBP50607 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.57■□□□□ 0.4
TUBP50607 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TUBP50607 AL355306.1-201ENST00000415580 579 ntBASIC17.57■□□□□ 0.4
TUBP50607 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.57■□□□□ 0.4
TUBP50607 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TUBP50607 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.57■□□□□ 0.4
TUBP50607 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.57■□□□□ 0.4
TUBP50607 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
TUBP50607 AL009183.1-201ENST00000603760 355 ntBASIC17.57■□□□□ 0.4
TUBP50607 AL161645.1-201ENST00000622716 1255 ntBASIC17.57■□□□□ 0.4
TUBP50607 AC105339.1-204ENST00000636249 355 ntBASIC17.57■□□□□ 0.4
TUBP50607 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBP50607 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBP50607 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TUBP50607 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
TUBP50607 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.57■□□□□ 0.4
TUBP50607 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBP50607 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBP50607 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBP50607 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
TUBP50607 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TUBP50607 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.56■□□□□ 0.4
TUBP50607 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 AC131009.4-201ENST00000624048 1740 ntBASIC17.56■□□□□ 0.4
TUBP50607 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TUBP50607 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.56■□□□□ 0.4
TUBP50607 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.56■□□□□ 0.4
TUBP50607 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.56■□□□□ 0.4
TUBP50607 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.56■□□□□ 0.4
TUBP50607 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.56■□□□□ 0.4
TUBP50607 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.56■□□□□ 0.4
TUBP50607 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.56■□□□□ 0.4
TUBP50607 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.56■□□□□ 0.4
TUBP50607 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.56■□□□□ 0.4
TUBP50607 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.56■□□□□ 0.4
TUBP50607 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.56■□□□□ 0.4
TUBP50607 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBP50607 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TUBP50607 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TUBP50607 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TUBP50607 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.55■□□□□ 0.4
TUBP50607 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.55■□□□□ 0.4
TUBP50607 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBP50607 RN7SL589P-201ENST00000481268 310 ntBASIC17.55■□□□□ 0.4
TUBP50607 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms