Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP9P49458 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.86□□□□□ -0.03
SRP9P49458 PMPCAP1-201ENST00000508114 1576 ntBASIC14.86□□□□□ -0.03
SRP9P49458 ALOX12P2-203ENST00000570921 1945 ntBASIC14.86□□□□□ -0.03
SRP9P49458 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
SRP9P49458 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
SRP9P49458 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SRP9P49458 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SRP9P49458 AP005117.1-201ENST00000584346 1413 ntBASIC14.86□□□□□ -0.03
SRP9P49458 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SRP9P49458 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.86□□□□□ -0.03
SRP9P49458 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.86□□□□□ -0.03
SRP9P49458 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SRP9P49458 SCARNA2-201ENST00000458748 420 ntBASIC14.86□□□□□ -0.03
SRP9P49458 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SRP9P49458 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
SRP9P49458 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.86□□□□□ -0.03
SRP9P49458 STK25P1-201ENST00000585406 838 ntBASIC14.86□□□□□ -0.03
SRP9P49458 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP9P49458 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
SRP9P49458 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.86□□□□□ -0.03
SRP9P49458 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.86□□□□□ -0.03
SRP9P49458 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.86□□□□□ -0.03
SRP9P49458 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP9P49458 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.86□□□□□ -0.03
SRP9P49458 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.86□□□□□ -0.03
SRP9P49458 NFIC-211ENST00000641145 8399 ntBASIC14.86□□□□□ -0.03
SRP9P49458 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP9P49458 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.86□□□□□ -0.03
SRP9P49458 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.86□□□□□ -0.03
SRP9P49458 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP9P49458 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.86□□□□□ -0.03
SRP9P49458 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP9P49458 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SRP9P49458 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SRP9P49458 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.85□□□□□ -0.03
SRP9P49458 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SRP9P49458 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
SRP9P49458 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.85□□□□□ -0.03
SRP9P49458 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SRP9P49458 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
SRP9P49458 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.85□□□□□ -0.03
SRP9P49458 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SRP9P49458 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.85□□□□□ -0.03
SRP9P49458 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SRP9P49458 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
SRP9P49458 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 TPM4P1-201ENST00000436100 807 ntBASIC14.85□□□□□ -0.03
SRP9P49458 FAAHP1-202ENST00000446499 1238 ntBASIC14.85□□□□□ -0.03
SRP9P49458 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.85□□□□□ -0.03
SRP9P49458 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.85□□□□□ -0.03
SRP9P49458 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.85□□□□□ -0.03
SRP9P49458 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.85□□□□□ -0.03
SRP9P49458 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 MTDHP3-201ENST00000594186 672 ntBASIC14.85□□□□□ -0.03
SRP9P49458 AC008608.2-201ENST00000606089 416 ntBASIC14.85□□□□□ -0.03
SRP9P49458 AP001269.4-201ENST00000609611 512 ntBASIC14.85□□□□□ -0.03
SRP9P49458 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
SRP9P49458 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.85□□□□□ -0.03
SRP9P49458 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.85□□□□□ -0.03
SRP9P49458 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.85□□□□□ -0.03
SRP9P49458 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.85□□□□□ -0.03
SRP9P49458 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
SRP9P49458 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SRP9P49458 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRP9P49458 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.84□□□□□ -0.03
SRP9P49458 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SRP9P49458 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP9P49458 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SRP9P49458 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP9P49458 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP9P49458 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms