Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HADHAP40939 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HADHAP40939 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HADHAP40939 PRSS29P-201ENST00000440800 595 ntBASIC16.89■□□□□ 0.29
HADHAP40939 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HADHAP40939 AC108751.1-201ENST00000490852 363 ntBASIC16.89■□□□□ 0.29
HADHAP40939 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.89■□□□□ 0.29
HADHAP40939 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.89■□□□□ 0.29
HADHAP40939 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.89■□□□□ 0.29
HADHAP40939 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.89■□□□□ 0.29
HADHAP40939 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.89■□□□□ 0.29
HADHAP40939 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.89■□□□□ 0.29
HADHAP40939 AC010654.1-201ENST00000615722 808 ntBASIC16.89■□□□□ 0.29
HADHAP40939 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.89■□□□□ 0.29
HADHAP40939 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.89■□□□□ 0.29
HADHAP40939 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HADHAP40939 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
HADHAP40939 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.89■□□□□ 0.29
HADHAP40939 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HADHAP40939 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.89■□□□□ 0.29
HADHAP40939 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HADHAP40939 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HADHAP40939 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HADHAP40939 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HADHAP40939 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HADHAP40939 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HADHAP40939 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
HADHAP40939 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HADHAP40939 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HADHAP40939 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.89■□□□□ 0.29
HADHAP40939 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.89■□□□□ 0.29
HADHAP40939 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HADHAP40939 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.88■□□□□ 0.29
HADHAP40939 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.88■□□□□ 0.29
HADHAP40939 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HADHAP40939 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HADHAP40939 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HADHAP40939 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.88■□□□□ 0.29
HADHAP40939 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.88■□□□□ 0.29
HADHAP40939 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.88■□□□□ 0.29
HADHAP40939 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.88■□□□□ 0.29
HADHAP40939 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.88■□□□□ 0.29
HADHAP40939 IGHV3-22-201ENST00000520721 359 ntBASIC16.88■□□□□ 0.29
HADHAP40939 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.88■□□□□ 0.29
HADHAP40939 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HADHAP40939 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.88■□□□□ 0.29
HADHAP40939 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 AC004790.2-201ENST00000623588 572 ntBASIC16.88■□□□□ 0.29
HADHAP40939 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HADHAP40939 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.88■□□□□ 0.29
HADHAP40939 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.88■□□□□ 0.29
HADHAP40939 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.88■□□□□ 0.29
HADHAP40939 AL391005.1-201ENST00000623953 2435 ntBASIC16.88■□□□□ 0.29
HADHAP40939 AC006277.1-201ENST00000624348 1610 ntBASIC16.88■□□□□ 0.29
HADHAP40939 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.88■□□□□ 0.29
HADHAP40939 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HADHAP40939 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HADHAP40939 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HADHAP40939 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HADHAP40939 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HADHAP40939 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HADHAP40939 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HADHAP40939 AL353732.1-201ENST00000569618 1459 ntBASIC16.87■□□□□ 0.29
HADHAP40939 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HADHAP40939 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.87■□□□□ 0.29
HADHAP40939 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HADHAP40939 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.87■□□□□ 0.29
HADHAP40939 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HADHAP40939 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HADHAP40939 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HADHAP40939 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.87■□□□□ 0.29
HADHAP40939 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.87■□□□□ 0.29
HADHAP40939 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.87■□□□□ 0.29
HADHAP40939 UNC93B6-202ENST00000528242 690 ntBASIC16.87■□□□□ 0.29
HADHAP40939 AC107918.2-201ENST00000530817 355 ntBASIC16.87■□□□□ 0.29
HADHAP40939 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.87■□□□□ 0.29
HADHAP40939 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.87■□□□□ 0.29
HADHAP40939 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.87■□□□□ 0.29
HADHAP40939 AC005412.3-201ENST00000580309 715 ntBASIC16.87■□□□□ 0.29
HADHAP40939 MPDU1-223ENST00000582151 728 ntBASIC16.87■□□□□ 0.29
HADHAP40939 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.87■□□□□ 0.29
HADHAP40939 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.87■□□□□ 0.29
HADHAP40939 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HADHAP40939 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
HADHAP40939 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.87■□□□□ 0.29
HADHAP40939 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.87■□□□□ 0.29
HADHAP40939 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms