Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KRT2P35908 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT2P35908 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KRT2P35908 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KRT2P35908 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT2P35908 AL662844.4-201ENST00000606367 2838 ntBASIC19.08■□□□□ 0.65
KRT2P35908 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT2P35908 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT2P35908 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT2P35908 PCGF3-213ENST00000620529 1899 ntBASIC19.08■□□□□ 0.65
KRT2P35908 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT2P35908 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.08■□□□□ 0.64
KRT2P35908 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT2P35908 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
KRT2P35908 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT2P35908 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT2P35908 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.08■□□□□ 0.64
KRT2P35908 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.08■□□□□ 0.64
KRT2P35908 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT2P35908 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.08■□□□□ 0.64
KRT2P35908 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.08■□□□□ 0.64
KRT2P35908 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT2P35908 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
KRT2P35908 AL513190.1-201ENST00000621254 727 ntBASIC19.08■□□□□ 0.64
KRT2P35908 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
KRT2P35908 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.08■□□□□ 0.64
KRT2P35908 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
KRT2P35908 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT2P35908 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT2P35908 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
KRT2P35908 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
KRT2P35908 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
KRT2P35908 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT2P35908 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.07■□□□□ 0.64
KRT2P35908 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT2P35908 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT2P35908 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT2P35908 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT2P35908 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT2P35908 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
KRT2P35908 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
KRT2P35908 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.07■□□□□ 0.64
KRT2P35908 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
KRT2P35908 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT2P35908 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT2P35908 PDPK2P-202ENST00000562415 1191 ntBASIC19.07■□□□□ 0.64
KRT2P35908 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.07■□□□□ 0.64
KRT2P35908 AL009183.1-201ENST00000603760 355 ntBASIC19.07■□□□□ 0.64
KRT2P35908 AC020765.3-201ENST00000613051 740 ntBASIC19.07■□□□□ 0.64
KRT2P35908 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
KRT2P35908 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT2P35908 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT2P35908 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
KRT2P35908 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
KRT2P35908 AC006449.5-201ENST00000610658 2098 ntBASIC19.07■□□□□ 0.64
KRT2P35908 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT2P35908 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT2P35908 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT2P35908 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT2P35908 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT2P35908 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT2P35908 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KRT2P35908 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
KRT2P35908 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT2P35908 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT2P35908 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 AC092364.2-201ENST00000596710 2692 ntBASIC19.06■□□□□ 0.64
KRT2P35908 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT2P35908 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT2P35908 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KRT2P35908 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT2P35908 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT2P35908 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT2P35908 AC140658.5-201ENST00000438532 169 ntBASIC19.06■□□□□ 0.64
KRT2P35908 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms