Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFC1P35251 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFC1P35251 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
RFC1P35251 AC005052.1-201ENST00000625181 2492 ntBASIC17.58■□□□□ 0.41
RFC1P35251 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFC1P35251 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFC1P35251 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RFC1P35251 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.58■□□□□ 0.4
RFC1P35251 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RFC1P35251 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.58■□□□□ 0.4
RFC1P35251 IGLL3P-201ENST00000412472 434 ntBASIC17.58■□□□□ 0.4
RFC1P35251 CXCL1P1-201ENST00000502804 216 ntBASIC17.58■□□□□ 0.4
RFC1P35251 AC079776.4-201ENST00000511039 504 ntBASIC17.58■□□□□ 0.4
RFC1P35251 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.58■□□□□ 0.4
RFC1P35251 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.58■□□□□ 0.4
RFC1P35251 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.58■□□□□ 0.4
RFC1P35251 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.58■□□□□ 0.4
RFC1P35251 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.58■□□□□ 0.4
RFC1P35251 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.58■□□□□ 0.4
RFC1P35251 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RFC1P35251 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFC1P35251 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.57■□□□□ 0.4
RFC1P35251 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.57■□□□□ 0.4
RFC1P35251 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.57■□□□□ 0.4
RFC1P35251 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.57■□□□□ 0.4
RFC1P35251 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RFC1P35251 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
RFC1P35251 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.57■□□□□ 0.4
RFC1P35251 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 HCG4-201ENST00000418983 998 ntBASIC17.57■□□□□ 0.4
RFC1P35251 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.57■□□□□ 0.4
RFC1P35251 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.57■□□□□ 0.4
RFC1P35251 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.57■□□□□ 0.4
RFC1P35251 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.57■□□□□ 0.4
RFC1P35251 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RFC1P35251 Z83851.2-201ENST00000609564 659 ntBASIC17.57■□□□□ 0.4
RFC1P35251 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.57■□□□□ 0.4
RFC1P35251 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.57■□□□□ 0.4
RFC1P35251 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RFC1P35251 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 AC092364.2-201ENST00000596710 2692 ntBASIC17.57■□□□□ 0.4
RFC1P35251 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RFC1P35251 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.57■□□□□ 0.4
RFC1P35251 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFC1P35251 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.57■□□□□ 0.4
RFC1P35251 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.57■□□□□ 0.4
RFC1P35251 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.56■□□□□ 0.4
RFC1P35251 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RFC1P35251 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RFC1P35251 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RFC1P35251 AL031731.1-201ENST00000642131 2094 ntBASIC17.56■□□□□ 0.4
RFC1P35251 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFC1P35251 CRYGEP-201ENST00000412192 528 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms