Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 SLC25A1P1-201ENST00000528351 927 ntBASIC16.83■□□□□ 0.28
HLA-DPA1P20036 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 AC106730.1-201ENST00000566722 1090 ntBASIC16.83■□□□□ 0.28
HLA-DPA1P20036 MIR3909-201ENST00000579518 119 ntBASIC16.83■□□□□ 0.28
HLA-DPA1P20036 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 AC023141.13-201ENST00000604991 943 ntBASIC16.83■□□□□ 0.28
HLA-DPA1P20036 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 AL031731.1-201ENST00000642131 2094 ntBASIC16.83■□□□□ 0.28
HLA-DPA1P20036 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 GGT3P-204ENST00000453783 1664 ntBASIC16.82■□□□□ 0.28
HLA-DPA1P20036 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 RNU1-129P-201ENST00000384064 167 ntBASIC16.82■□□□□ 0.28
HLA-DPA1P20036 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 AL591424.1-201ENST00000442569 1213 ntBASIC16.82■□□□□ 0.28
HLA-DPA1P20036 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.82■□□□□ 0.28
HLA-DPA1P20036 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 U1.21-201ENST00000580816 167 ntBASIC16.82■□□□□ 0.28
HLA-DPA1P20036 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPA1P20036 GGT4P-201ENST00000623672 1708 ntBASIC16.82■□□□□ 0.28
HLA-DPA1P20036 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 AC007967.2-201ENST00000432613 625 ntBASIC16.81■□□□□ 0.28
HLA-DPA1P20036 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 AL031055.1-201ENST00000606362 631 ntBASIC16.81■□□□□ 0.28
HLA-DPA1P20036 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HLA-DPA1P20036 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 PMS2P4-201ENST00000412466 1052 ntBASIC16.8■□□□□ 0.28
HLA-DPA1P20036 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms