Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.93■□□□□ 0.78
NCLP19338 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.93■□□□□ 0.78
NCLP19338 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.93■□□□□ 0.78
NCLP19338 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCLP19338 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCLP19338 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NCLP19338 AC125634.1-201ENST00000438758 1403 ntBASIC19.93■□□□□ 0.78
NCLP19338 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCLP19338 AC105917.1-201ENST00000506637 2539 ntBASIC19.93■□□□□ 0.78
NCLP19338 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
NCLP19338 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLP19338 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCLP19338 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLP19338 AL049757.1-201ENST00000616842 1596 ntBASIC19.92■□□□□ 0.78
NCLP19338 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLP19338 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCLP19338 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.92■□□□□ 0.78
NCLP19338 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLP19338 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLP19338 TPM4P1-201ENST00000436100 807 ntBASIC19.92■□□□□ 0.78
NCLP19338 TOB2P1-201ENST00000469761 992 ntBASIC19.92■□□□□ 0.78
NCLP19338 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.92■□□□□ 0.78
NCLP19338 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.92■□□□□ 0.78
NCLP19338 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.92■□□□□ 0.78
NCLP19338 AL691432.3-201ENST00000621860 400 ntBASIC19.92■□□□□ 0.78
NCLP19338 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLP19338 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLP19338 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.92■□□□□ 0.78
NCLP19338 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLP19338 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLP19338 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLP19338 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NCLP19338 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLP19338 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NCLP19338 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCLP19338 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.92■□□□□ 0.78
NCLP19338 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
NCLP19338 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC19.92■□□□□ 0.78
NCLP19338 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NCLP19338 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NCLP19338 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
NCLP19338 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCLP19338 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.91■□□□□ 0.78
NCLP19338 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.91■□□□□ 0.78
NCLP19338 AC022188.1-201ENST00000620960 1664 ntBASIC19.91■□□□□ 0.78
NCLP19338 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.91■□□□□ 0.78
NCLP19338 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NCLP19338 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
NCLP19338 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NCLP19338 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCLP19338 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCLP19338 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCLP19338 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCLP19338 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.91■□□□□ 0.78
NCLP19338 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.91■□□□□ 0.78
NCLP19338 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
NCLP19338 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NCLP19338 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.91■□□□□ 0.78
NCLP19338 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.91■□□□□ 0.78
NCLP19338 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.91■□□□□ 0.78
NCLP19338 AL592071.1-201ENST00000611956 408 ntBASIC19.91■□□□□ 0.78
NCLP19338 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCLP19338 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.91■□□□□ 0.78
NCLP19338 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NCLP19338 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCLP19338 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NCLP19338 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCLP19338 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCLP19338 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.91■□□□□ 0.78
NCLP19338 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCLP19338 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC19.91■□□□□ 0.78
NCLP19338 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC19.91■□□□□ 0.78
NCLP19338 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NCLP19338 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.91■□□□□ 0.78
NCLP19338 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.9■□□□□ 0.78
NCLP19338 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.9■□□□□ 0.78
NCLP19338 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
NCLP19338 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.9■□□□□ 0.78
NCLP19338 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NCLP19338 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NCLP19338 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
NCLP19338 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 RN7SL606P-201ENST00000472779 293 ntBASIC19.9■□□□□ 0.78
NCLP19338 AP000867.3-201ENST00000524675 377 ntBASIC19.9■□□□□ 0.78
NCLP19338 AC012615.1-201ENST00000565797 1299 ntBASIC19.9■□□□□ 0.78
NCLP19338 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.9■□□□□ 0.78
NCLP19338 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.9■□□□□ 0.78
NCLP19338 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NCLP19338 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NCLP19338 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms