Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AL031731.1-201ENST00000642131 2094 ntBASIC17.57■□□□□ 0.4
KRT3P12035 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT3P12035 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.57■□□□□ 0.4
KRT3P12035 HCG4B-203ENST00000450128 991 ntBASIC17.57■□□□□ 0.4
KRT3P12035 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
KRT3P12035 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT3P12035 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT3P12035 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.57■□□□□ 0.4
KRT3P12035 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.57■□□□□ 0.4
KRT3P12035 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KRT3P12035 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT3P12035 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT3P12035 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KRT3P12035 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT3P12035 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT3P12035 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT3P12035 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT3P12035 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT3P12035 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
KRT3P12035 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
KRT3P12035 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KRT3P12035 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.56■□□□□ 0.4
KRT3P12035 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
KRT3P12035 IGLL3P-201ENST00000412472 434 ntBASIC17.56■□□□□ 0.4
KRT3P12035 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT3P12035 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 AL513480.1-201ENST00000451731 511 ntBASIC17.56■□□□□ 0.4
KRT3P12035 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT3P12035 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT3P12035 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.56■□□□□ 0.4
KRT3P12035 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KRT3P12035 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
KRT3P12035 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KRT3P12035 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT3P12035 AC104109.2-201ENST00000602919 1418 ntBASIC17.55■□□□□ 0.4
KRT3P12035 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KRT3P12035 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT3P12035 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 GGT3P-204ENST00000453783 1664 ntBASIC17.55■□□□□ 0.4
KRT3P12035 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
KRT3P12035 ME2P1-201ENST00000426028 1970 ntBASIC17.55■□□□□ 0.4
KRT3P12035 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT3P12035 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
KRT3P12035 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT3P12035 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT3P12035 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
KRT3P12035 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT3P12035 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT3P12035 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 AC145285.3-201ENST00000564603 959 ntBASIC17.55■□□□□ 0.4
KRT3P12035 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.55■□□□□ 0.4
KRT3P12035 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT3P12035 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
KRT3P12035 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
KRT3P12035 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT3P12035 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms