Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPB41P11171 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.32■□□□□ 0.52
EPB41P11171 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.32■□□□□ 0.52
EPB41P11171 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
EPB41P11171 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
EPB41P11171 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.31■□□□□ 0.52
EPB41P11171 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.31■□□□□ 0.52
EPB41P11171 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.31■□□□□ 0.52
EPB41P11171 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.31■□□□□ 0.52
EPB41P11171 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
EPB41P11171 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.31■□□□□ 0.52
EPB41P11171 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.31■□□□□ 0.52
EPB41P11171 OR7E47P-204ENST00000575924 449 ntBASIC18.31■□□□□ 0.52
EPB41P11171 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
EPB41P11171 AC116407.3-201ENST00000623905 1129 ntBASIC18.31■□□□□ 0.52
EPB41P11171 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.31■□□□□ 0.52
EPB41P11171 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.31■□□□□ 0.52
EPB41P11171 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
EPB41P11171 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.31■□□□□ 0.52
EPB41P11171 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.31■□□□□ 0.52
EPB41P11171 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.31■□□□□ 0.52
EPB41P11171 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPB41P11171 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.31■□□□□ 0.52
EPB41P11171 AL671710.1-201ENST00000610245 2349 ntBASIC18.31■□□□□ 0.52
EPB41P11171 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
EPB41P11171 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
EPB41P11171 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.3■□□□□ 0.52
EPB41P11171 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
EPB41P11171 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
EPB41P11171 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.3■□□□□ 0.52
EPB41P11171 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.3■□□□□ 0.52
EPB41P11171 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 ALOX12P2-203ENST00000570921 1945 ntBASIC18.3■□□□□ 0.52
EPB41P11171 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
EPB41P11171 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.3■□□□□ 0.52
EPB41P11171 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.3■□□□□ 0.52
EPB41P11171 PRSS29P-201ENST00000440800 595 ntBASIC18.3■□□□□ 0.52
EPB41P11171 RNA5SP419-201ENST00000515908 135 ntBASIC18.3■□□□□ 0.52
EPB41P11171 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.3■□□□□ 0.52
EPB41P11171 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
EPB41P11171 SLC25A6P4-201ENST00000586535 553 ntBASIC18.3■□□□□ 0.52
EPB41P11171 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.3■□□□□ 0.52
EPB41P11171 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.3■□□□□ 0.52
EPB41P11171 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.3■□□□□ 0.52
EPB41P11171 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.3■□□□□ 0.52
EPB41P11171 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.3■□□□□ 0.52
EPB41P11171 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.3■□□□□ 0.52
EPB41P11171 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.3■□□□□ 0.52
EPB41P11171 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.3■□□□□ 0.52
EPB41P11171 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPB41P11171 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
EPB41P11171 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
EPB41P11171 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EPB41P11171 AL512652.2-201ENST00000625156 1716 ntBASIC18.29■□□□□ 0.52
EPB41P11171 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EPB41P11171 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EPB41P11171 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EPB41P11171 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
EPB41P11171 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EPB41P11171 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EPB41P11171 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EPB41P11171 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EPB41P11171 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms