Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD48P09326 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD48P09326 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.27■□□□□ 0.36
CD48P09326 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CD48P09326 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CD48P09326 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.27■□□□□ 0.36
CD48P09326 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.27■□□□□ 0.36
CD48P09326 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD48P09326 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CD48P09326 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD48P09326 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD48P09326 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD48P09326 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.27■□□□□ 0.36
CD48P09326 HMGA1P7-201ENST00000406908 502 ntBASIC17.27■□□□□ 0.36
CD48P09326 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.27■□□□□ 0.36
CD48P09326 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.27■□□□□ 0.36
CD48P09326 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.27■□□□□ 0.36
CD48P09326 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CD48P09326 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CD48P09326 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.27■□□□□ 0.36
CD48P09326 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.27■□□□□ 0.36
CD48P09326 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.27■□□□□ 0.36
CD48P09326 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD48P09326 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.27■□□□□ 0.36
CD48P09326 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.27■□□□□ 0.36
CD48P09326 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.27■□□□□ 0.36
CD48P09326 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CD48P09326 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CD48P09326 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD48P09326 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD48P09326 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD48P09326 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD48P09326 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CD48P09326 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CD48P09326 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD48P09326 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.27■□□□□ 0.35
CD48P09326 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.26■□□□□ 0.35
CD48P09326 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.26■□□□□ 0.35
CD48P09326 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.26■□□□□ 0.35
CD48P09326 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.26■□□□□ 0.35
CD48P09326 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CD48P09326 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.26■□□□□ 0.35
CD48P09326 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CD48P09326 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CD48P09326 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CD48P09326 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.26■□□□□ 0.35
CD48P09326 FDX1P1-201ENST00000449115 551 ntBASIC17.26■□□□□ 0.35
CD48P09326 AC079776.4-201ENST00000511039 504 ntBASIC17.26■□□□□ 0.35
CD48P09326 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.26■□□□□ 0.35
CD48P09326 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.26■□□□□ 0.35
CD48P09326 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 MIR4515-201ENST00000584082 81 ntBASIC17.26■□□□□ 0.35
CD48P09326 Z83851.2-201ENST00000609564 659 ntBASIC17.26■□□□□ 0.35
CD48P09326 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.26■□□□□ 0.35
CD48P09326 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 AC010507.1-201ENST00000633895 436 ntBASIC17.26■□□□□ 0.35
CD48P09326 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CD48P09326 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.26■□□□□ 0.35
CD48P09326 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.26■□□□□ 0.35
CD48P09326 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CD48P09326 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CD48P09326 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CD48P09326 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.26■□□□□ 0.35
CD48P09326 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD48P09326 AC008894.3-201ENST00000624324 3103 ntBASIC17.25■□□□□ 0.35
CD48P09326 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD48P09326 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD48P09326 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CD48P09326 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD48P09326 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD48P09326 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD48P09326 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.25■□□□□ 0.35
CD48P09326 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.25■□□□□ 0.35
CD48P09326 PCGF3-213ENST00000620529 1899 ntBASIC17.25■□□□□ 0.35
CD48P09326 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.25■□□□□ 0.35
CD48P09326 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms