Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RHOP08100 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.15■□□□□ 0.34
RHOP08100 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RHOP08100 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
RHOP08100 AC004840.1-201ENST00000636359 365 ntBASIC17.15■□□□□ 0.34
RHOP08100 AL139011.1-202ENST00000642063 584 ntBASIC17.15■□□□□ 0.34
RHOP08100 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.15■□□□□ 0.34
RHOP08100 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.15■□□□□ 0.34
RHOP08100 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RHOP08100 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHOP08100 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.15■□□□□ 0.34
RHOP08100 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RHOP08100 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RHOP08100 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHOP08100 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.15■□□□□ 0.34
RHOP08100 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RHOP08100 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHOP08100 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
RHOP08100 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RHOP08100 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.14■□□□□ 0.34
RHOP08100 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RHOP08100 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RHOP08100 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RHOP08100 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.14■□□□□ 0.33
RHOP08100 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.14■□□□□ 0.33
RHOP08100 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RHOP08100 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.14■□□□□ 0.33
RHOP08100 AC007541.1-201ENST00000570282 1469 ntBASIC17.14■□□□□ 0.33
RHOP08100 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHOP08100 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHOP08100 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHOP08100 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RHOP08100 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.14■□□□□ 0.33
RHOP08100 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RHOP08100 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.14■□□□□ 0.33
RHOP08100 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RHOP08100 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.14■□□□□ 0.33
RHOP08100 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.14■□□□□ 0.33
RHOP08100 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.14■□□□□ 0.33
RHOP08100 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.14■□□□□ 0.33
RHOP08100 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.14■□□□□ 0.33
RHOP08100 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RHOP08100 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.14■□□□□ 0.33
RHOP08100 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.14■□□□□ 0.33
RHOP08100 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.14■□□□□ 0.33
RHOP08100 AL132655.2-201ENST00000596276 594 ntBASIC17.14■□□□□ 0.33
RHOP08100 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.14■□□□□ 0.33
RHOP08100 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.14■□□□□ 0.33
RHOP08100 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.14■□□□□ 0.33
RHOP08100 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.14■□□□□ 0.33
RHOP08100 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RHOP08100 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.14■□□□□ 0.33
RHOP08100 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RHOP08100 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RHOP08100 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.14■□□□□ 0.33
RHOP08100 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RHOP08100 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHOP08100 AL133373.2-201ENST00000623187 2828 ntBASIC17.14■□□□□ 0.33
RHOP08100 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RHOP08100 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RHOP08100 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RHOP08100 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.13■□□□□ 0.33
RHOP08100 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RHOP08100 AL512652.2-201ENST00000625156 1716 ntBASIC17.13■□□□□ 0.33
RHOP08100 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHOP08100 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.13■□□□□ 0.33
RHOP08100 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RHOP08100 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RHOP08100 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.13■□□□□ 0.33
RHOP08100 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHOP08100 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.13■□□□□ 0.33
RHOP08100 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHOP08100 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.13■□□□□ 0.33
RHOP08100 AC093724.1-201ENST00000448659 1027 ntBASIC17.13■□□□□ 0.33
RHOP08100 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.13■□□□□ 0.33
RHOP08100 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.13■□□□□ 0.33
RHOP08100 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RHOP08100 AC135586.1-201ENST00000539323 574 ntBASIC17.13■□□□□ 0.33
RHOP08100 TP53TG3HP-202ENST00000569755 579 ntBASIC17.13■□□□□ 0.33
RHOP08100 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.13■□□□□ 0.33
RHOP08100 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RHOP08100 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.13■□□□□ 0.33
RHOP08100 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RHOP08100 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHOP08100 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RHOP08100 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHOP08100 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHOP08100 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHOP08100 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RHOP08100 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RHOP08100 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHOP08100 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.13■□□□□ 0.33
RHOP08100 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RHOP08100 AC141586.5-201ENST00000624546 2050 ntBASIC17.12■□□□□ 0.33
RHOP08100 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHOP08100 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHOP08100 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RHOP08100 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHOP08100 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RHOP08100 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms