Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
POLR3DP05423 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.9■□□□□ 0.78
POLR3DP05423 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR3DP05423 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR3DP05423 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR3DP05423 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.9■□□□□ 0.78
POLR3DP05423 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR3DP05423 AC105020.1-201ENST00000435356 2205 ntBASIC19.9■□□□□ 0.78
POLR3DP05423 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR3DP05423 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR3DP05423 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.9■□□□□ 0.78
POLR3DP05423 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR3DP05423 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR3DP05423 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR3DP05423 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
POLR3DP05423 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.89■□□□□ 0.78
POLR3DP05423 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.89■□□□□ 0.78
POLR3DP05423 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
POLR3DP05423 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR3DP05423 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
POLR3DP05423 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR3DP05423 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR3DP05423 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
POLR3DP05423 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR3DP05423 SPCS2P4-201ENST00000436160 681 ntBASIC19.89■□□□□ 0.77
POLR3DP05423 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
POLR3DP05423 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
POLR3DP05423 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
POLR3DP05423 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.89■□□□□ 0.77
POLR3DP05423 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.89■□□□□ 0.77
POLR3DP05423 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.89■□□□□ 0.77
POLR3DP05423 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.89■□□□□ 0.77
POLR3DP05423 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
POLR3DP05423 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR3DP05423 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
POLR3DP05423 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR3DP05423 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR3DP05423 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR3DP05423 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.88■□□□□ 0.77
POLR3DP05423 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.88■□□□□ 0.77
POLR3DP05423 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.88■□□□□ 0.77
POLR3DP05423 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR3DP05423 AC069335.1-201ENST00000489972 472 ntBASIC19.88■□□□□ 0.77
POLR3DP05423 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.88■□□□□ 0.77
POLR3DP05423 AC109322.1-201ENST00000524499 1264 ntBASIC19.88■□□□□ 0.77
POLR3DP05423 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.88■□□□□ 0.77
POLR3DP05423 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.88■□□□□ 0.77
POLR3DP05423 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.88■□□□□ 0.77
POLR3DP05423 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR3DP05423 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
POLR3DP05423 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR3DP05423 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
POLR3DP05423 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR3DP05423 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
POLR3DP05423 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.88■□□□□ 0.77
POLR3DP05423 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
POLR3DP05423 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR3DP05423 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
POLR3DP05423 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 UXT-AS1-201ENST00000590504 1525 ntBASIC19.87■□□□□ 0.77
POLR3DP05423 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.87■□□□□ 0.77
POLR3DP05423 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 KRT18P32-201ENST00000424695 1287 ntBASIC19.87■□□□□ 0.77
POLR3DP05423 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR3DP05423 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 HMGN1P19-201ENST00000436976 333 ntBASIC19.87■□□□□ 0.77
POLR3DP05423 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR3DP05423 CYMP-203ENST00000474680 1263 ntBASIC19.87■□□□□ 0.77
POLR3DP05423 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.87■□□□□ 0.77
POLR3DP05423 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
POLR3DP05423 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
POLR3DP05423 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.87■□□□□ 0.77
POLR3DP05423 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms