Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRAP04437 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRAP04437 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRAP04437 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRAP04437 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRAP04437 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.74□□□□□ -0.37
TCRAP04437 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TCRAP04437 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.74□□□□□ -0.37
TCRAP04437 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TCRAP04437 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
TCRAP04437 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.73□□□□□ -0.37
TCRAP04437 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
TCRAP04437 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 AC148477.5-201ENST00000625164 1645 ntBASIC12.73□□□□□ -0.37
TCRAP04437 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TCRAP04437 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.73□□□□□ -0.37
TCRAP04437 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 AC023824.1-201ENST00000562945 2975 ntBASIC12.73□□□□□ -0.37
TCRAP04437 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.73□□□□□ -0.37
TCRAP04437 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.73□□□□□ -0.37
TCRAP04437 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
TCRAP04437 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TCRAP04437 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.73□□□□□ -0.37
TCRAP04437 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.73□□□□□ -0.37
TCRAP04437 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.73□□□□□ -0.37
TCRAP04437 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.73□□□□□ -0.37
TCRAP04437 AC083849.1-201ENST00000615227 514 ntBASIC12.73□□□□□ -0.37
TCRAP04437 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TCRAP04437 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.73□□□□□ -0.37
TCRAP04437 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.73□□□□□ -0.37
TCRAP04437 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.73□□□□□ -0.37
TCRAP04437 AC144831.1-201ENST00000573312 2656 ntBASIC12.73□□□□□ -0.37
TCRAP04437 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
TCRAP04437 PMPCAP1-201ENST00000508114 1576 ntBASIC12.73□□□□□ -0.37
TCRAP04437 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TCRAP04437 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TCRAP04437 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 AC097637.2-201ENST00000624096 1997 ntBASIC12.72□□□□□ -0.37
TCRAP04437 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TCRAP04437 AC073508.3-201ENST00000619697 1419 ntBASIC12.72□□□□□ -0.37
TCRAP04437 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRAP04437 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 AL671710.1-201ENST00000610245 2349 ntBASIC12.72□□□□□ -0.37
TCRAP04437 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.72□□□□□ -0.37
TCRAP04437 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRAP04437 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRAP04437 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRAP04437 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TCRAP04437 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRAP04437 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.72□□□□□ -0.37
TCRAP04437 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.72□□□□□ -0.37
TCRAP04437 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.72□□□□□ -0.37
TCRAP04437 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
TCRAP04437 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms