Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 FAM197Y3-203ENST00000618346 717 ntBASIC13.15□□□□□ -0.3
TRGV3P03979 AC010507.1-201ENST00000633895 436 ntBASIC13.15□□□□□ -0.3
TRGV3P03979 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV3P03979 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.15□□□□□ -0.3
TRGV3P03979 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV3P03979 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV3P03979 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV3P03979 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV3P03979 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV3P03979 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV3P03979 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRGV3P03979 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV3P03979 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV3P03979 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV3P03979 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRGV3P03979 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRGV3P03979 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.31
TRGV3P03979 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRGV3P03979 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.15□□□□□ -0.31
TRGV3P03979 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
TRGV3P03979 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.14□□□□□ -0.31
TRGV3P03979 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.14□□□□□ -0.31
TRGV3P03979 AC012569.1-201ENST00000591191 1524 ntBASIC13.14□□□□□ -0.31
TRGV3P03979 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
TRGV3P03979 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.14□□□□□ -0.31
TRGV3P03979 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.14□□□□□ -0.31
TRGV3P03979 IGLL3P-201ENST00000412472 434 ntBASIC13.14□□□□□ -0.31
TRGV3P03979 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TRGV3P03979 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.14□□□□□ -0.31
TRGV3P03979 PMS2P1-201ENST00000431037 1228 ntBASIC13.14□□□□□ -0.31
TRGV3P03979 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
TRGV3P03979 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TRGV3P03979 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.14□□□□□ -0.31
TRGV3P03979 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.14□□□□□ -0.31
TRGV3P03979 AC018845.2-201ENST00000568326 409 ntBASIC13.14□□□□□ -0.31
TRGV3P03979 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.14□□□□□ -0.31
TRGV3P03979 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
TRGV3P03979 AC023141.13-201ENST00000604991 943 ntBASIC13.14□□□□□ -0.31
TRGV3P03979 ACTL9-202ENST00000612068 1252 ntBASIC13.14□□□□□ -0.31
TRGV3P03979 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
TRGV3P03979 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 AC106886.4-201ENST00000623557 2502 ntBASIC13.14□□□□□ -0.31
TRGV3P03979 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.14□□□□□ -0.31
TRGV3P03979 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRGV3P03979 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.14□□□□□ -0.31
TRGV3P03979 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRGV3P03979 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV3P03979 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.14□□□□□ -0.31
TRGV3P03979 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.13□□□□□ -0.31
TRGV3P03979 LINC00895-201ENST00000629028 1637 ntBASIC13.13□□□□□ -0.31
TRGV3P03979 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 UBALD1-205ENST00000590891 2641 ntBASIC13.13□□□□□ -0.31
TRGV3P03979 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TRGV3P03979 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.13□□□□□ -0.31
TRGV3P03979 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRGV3P03979 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRGV3P03979 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.13□□□□□ -0.31
TRGV3P03979 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRGV3P03979 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.13□□□□□ -0.31
TRGV3P03979 AC068587.6-202ENST00000641839 5619 ntBASIC13.13□□□□□ -0.31
TRGV3P03979 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.13□□□□□ -0.31
TRGV3P03979 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.13□□□□□ -0.31
TRGV3P03979 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.13□□□□□ -0.31
TRGV3P03979 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.13□□□□□ -0.31
TRGV3P03979 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms