Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 GGT4P-201ENST00000623672 1708 ntBASIC13.4□□□□□ -0.26
APOC3P02656 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC3P02656 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC13.4□□□□□ -0.26
APOC3P02656 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC3P02656 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
APOC3P02656 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.4□□□□□ -0.26
APOC3P02656 AC005104.2-201ENST00000427818 678 ntBASIC13.4□□□□□ -0.26
APOC3P02656 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
APOC3P02656 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
APOC3P02656 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.4□□□□□ -0.26
APOC3P02656 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.4□□□□□ -0.26
APOC3P02656 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.4□□□□□ -0.26
APOC3P02656 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.4□□□□□ -0.26
APOC3P02656 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC3P02656 RASA4CP-201ENST00000424092 1398 ntBASIC13.4□□□□□ -0.26
APOC3P02656 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC3P02656 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC3P02656 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC3P02656 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
APOC3P02656 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
APOC3P02656 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC3P02656 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC3P02656 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC3P02656 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC3P02656 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOC3P02656 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC3P02656 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.4□□□□□ -0.26
APOC3P02656 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOC3P02656 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
APOC3P02656 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
APOC3P02656 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
APOC3P02656 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
APOC3P02656 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.39□□□□□ -0.27
APOC3P02656 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.39□□□□□ -0.27
APOC3P02656 Z85996.1-201ENST00000494644 937 ntBASIC13.39□□□□□ -0.27
APOC3P02656 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.39□□□□□ -0.27
APOC3P02656 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.39□□□□□ -0.27
APOC3P02656 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
APOC3P02656 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
APOC3P02656 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
APOC3P02656 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
APOC3P02656 Z82170.1-201ENST00000625081 3192 ntBASIC13.39□□□□□ -0.27
APOC3P02656 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
APOC3P02656 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.39□□□□□ -0.27
APOC3P02656 BEND3P1-201ENST00000421591 1944 ntBASIC13.39□□□□□ -0.27
APOC3P02656 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOC3P02656 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
APOC3P02656 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
APOC3P02656 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.39□□□□□ -0.27
APOC3P02656 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.38□□□□□ -0.27
APOC3P02656 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC3P02656 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms